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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Linum usitatissimum
M-type_MADS Family| Phylogenetic tree for domain ? help Back to Top |
|---|
/------------------------------------------------------------------- Lus10012656/7-44 (1)
|
|------------------------------------------------------------------- Lus10024347/6-44 (61)
|
| /------------------ Lus10007713/11-56 (2)
| |
| /--97-+ /------------ Lus10007711/11-49 (10)
| | | |
| | \--55-+ /------ Lus10004459/3-30 (11)
| | \-100-+
| | \------ Lus10000400/3-30 (67)
| |
| | /------ Lus10016180/11-48 (5)
| /--68-+ /-100-+
| | | | \------ Lus10029367/11-49 (14)
| | |-----88----+
| | | | /------ Lus10032108/11-52 (28)
| | | \--87-+
| | | \------ Lus10014578/11-52 (66)
| | |
| /--75--+ \------------------------ Lus10014883/11-48 (46)
| | |
| | | /------ Lus10022325/6-43 (16)
| | |-----------89----------+
| | | \------ Lus10004150/10-50 (43)
| /--85-+ |
| | | \------------------------------ Lus10022316/11-48 (32)
| | |
| | | /------ Lus10028653/10-50 (21)
| | \--------------100-------------+
| | \------ Lus10000974/10-50 (22)
| |
| | /------ Lus10020789/3-43 (8)
| /-----63----+ /--88-+
| | | | \------ Lus10007371/10-50 (18)
| | |--------------100-------------+
| | | | /------ Lus10014095/11-51 (27)
| | | \-100-+
| | | \------ Lus10019819/10-51 (65)
| | |
| | \------------------------------------------- Lus10021399/9-50 (50)
| |
| | /------ Lus10012449/4-50 (3)
| | /--98-+
| | | \------ Lus10020511/7-50 (45)
| | /-----------------58-----------------+
| | | | /------ Lus10030663/17-65 (47)
| | | \--87-+
+ | | \------ Lus10030824/19-65 (57)
| | |
| | | /------------ Lus10011456/10-42 (4)
| | | |
| | | /--------66-------+ /------ Lus10022505/9-51 (25)
| | | | \-100-+
| | | | \------ Lus10016809/9-51 (56)
| | | |
| | | | /------ Lus10024823/9-58 (6)
| | | |-----------82----------+
| | | | \------ Lus10018714/9-58 (9)
| | | |
| /-100-+ | | /------ Lus10039704/11-55 (23)
| | | | |----------100----------+
| | | | /--55--+ \------ Lus10018493/10-55 (51)
| | | | | |
| | | | | | /------------------ Lus10034464/10-53 (38)
| | | | | | |
| | | | | | | /------ Lus10037166/10-53 (42)
| | | | | | /--57-+ /-100-+
| | | | | | | | | \------ Lus10036761/10-53 (53)
| | | | | | | | |
| | | | | | | \-100-+------------ Lus10030450/10-53 (48)
| | | | | \-100-+ |
| | | | | | \------------ Lus10026613/10-53 (62)
| | | | | |
| | | | /--57-+ \------------------------ Lus10019089/9-53 (63)
| | | | | |
| | | | | |------------------------------------- Lus10036543/10-59 (13)
| | | | | |
| | | | | |------------------------------------- Lus10011349/9-59 (19)
| | | | | |
| | | | | | /------ Lus10028214/10-59 (33)
| | | | | | /--94-+
| | | | | | | \------ Lus10042918/10-59 (58)
| | | | | |-----------100----------+
| | | | | | \------------ Lus10029556/10-59 (55)
| | | | | |
| | \--97-+--56-+ \------------------------------------- Lus10002763/26-76 (35)
| | | |
| | | | /------ Lus10037039/9-59 (17)
| | | | /-100-+
| | | | | \------ Lus10015766/9-59 (20)
| | | |--------------90--------------+
| | | | | /------ Lus10035029/10-59 (26)
| | | | \--57-+
| | | | \------ Lus10003123/9-59 (39)
| | | |
\--51-+ | | /------ Lus10041548/10-58 (52)
| | \-----------------100----------------+
| | \------ Lus10012545/10-58 (60)
| |
| | /------------ Lus10011787/11-53 (7)
| | |
| |-----------------100----------------+ /------ Lus10016563/11-56 (31)
| | \--55-+
| | \------ Lus10040832/11-56 (37)
| |
| | /------ Lus10028490/41-90 (15)
| | /-100-+
| | | \------ Lus10028473/41-90 (41)
| | /-100-+
| | | \------------ Lus10025872/42-91 (40)
| |--------------94--------------+
| | \------------------ Lus10015271/20-67 (59)
| |
| | /------ Lus10042291/61-104 (24)
| |--------------------100-------------------+
| | \------ Lus10026366/44-87 (49)
| |
| | /------------------ Lus10015726/23-68 (29)
| | |
| | | /------ Lus10003940/38-83 (30)
| |--------------100-------------+ /-100-+
| | | | \------ Lus10037450/36-81 (44)
| | \--88-+
| | \------------ Lus10003481/22-67 (54)
| |
| | /------ Lus10035456/3-50 (34)
| \--------------------89--------------------+
| \------ Lus10031073/3-50 (64)
|
|------------------------------------------------------------- Lus10022594/6-44 (12)
|
\------------------------------------------------------------- Lus10021494/6-44 (36)
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| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 114:
/--------------- Lus10022325 (3)
|
| /----- Lus10007711 (8)
/--99-+ /-100+
| | | \----- Lus10007713 (42)
| \-96-+
| | /----- Lus10000400 (10)
/-100+ \-100+
| | \----- Lus10004459 (15)
| |
| | /----- Lus10022316 (5)
/-100+ \------100------+
| | \----- Lus10014883 (66)
| |
| | /----- Lus10014578 (58)
| \---------100--------+
| \----- Lus10032108 (67)
|
| /----- Lus10016180 (33)
/-81-+ /-100+
| | | \----- Lus10029367 (61)
| |---------100--------+
| | | /----- Lus10004150 (37)
| | \-75-+
| | \----- Lus10021399 (38)
| |
| | /----- Lus10000974 (43)
| \-----------100-----------+
/-100+ \----- Lus10028653 (60)
| |
| | /----- Lus10022594 (13)
| | /-100+
| | | \----- Lus10021494 (35)
| | /-100+
| | | | /----- Lus10012656 (24)
| | | \-97-+
| | | \----- Lus10024347 (53)
| \---------55---------+
| | /----- Lus10014095 (21)
| | /-100+
| | | \----- Lus10019819 (63)
| \-100+
| | /----- Lus10007371 (22)
| \-100+
| \----- Lus10020789 (45)
|
| /----- Lus10026366 (4)
| /---100---+
/-50-+ | \----- Lus10042291 (6)
| | |
| | | /----- Lus10037450 (23)
| | /----91----+ /-100+
| | | | | \----- Lus10003940 (29)
| | | | |
| | | \-100+---------- Lus10003481 (47)
| | | |
| | | \---------- Lus10015726 (62)
| | |
| | |-------------------------- Lus10011456 (14)
| | |
| | | /---------- Lus10025872 (16)
| | | |
| | | /-100+ /----- Lus10028490 (18)
| | | | \-100+
| | | /--70-+ \----- Lus10028473 (30)
| | | | |
| | | | \--------------- Lus10015271 (34)
| \------87------+-61-+
/--67-+ | | /----- Lus10035456 (41)
| | | \------100------+
| | | \----- Lus10031073 (48)
| | |
| | | /----- Lus10012449 (28)
| | |---------100--------+
| | | \----- Lus10020511 (44)
| | |
| | | /----- Lus10030824 (31)
| | |---------100--------+
| | | \----- Lus10030663 (57)
| | |
| | | /----- Lus10040832 (39)
| | | /-74-+
/-63-+ | | | \----- Lus10016563 (55)
| | | \------100------+
| | | \---------- Lus10011787 (46)
| | |
| | | /----- Lus10039704 (19)
| | \-------------------100------------------+
| | \----- Lus10018493 (36)
| |
| | /----- Lus10030450 (12)
| | /-100+
| | | \----- Lus10026613 (50)
/-80-+ | /-100+
| | | | | /----- Lus10037166 (27)
| | | | \-100+
| | \-----------------100----------------+ \----- Lus10036761 (54)
| | |
| | | /----- Lus10034464 (32)
| | \---100---+
--84-+ | \----- Lus10019089 (65)
| |
| | /----- Lus10016809 (11)
| \------------------------100------------------------+
| \----- Lus10022505 (59)
|
| /----- Lus10024823 (7)
\---------------------------100--------------------------+
\----- Lus10018714 (40)
Root part of tree:
/------------------------------------------------------------------- Lus10029556 (1)
|
| /------------- (114)
| /-------------------53-------------------+
| | \------------- Lus10036543 (26)
| |
| | /------------- Lus10015766 (9)
| | /-----100-----+
| | | \------------- Lus10037039 (17)
| | /-----95-----+
| | | | /------------- Lus10035029 (25)
|-----100----+ | \------69-----+
+ |------79-----+ \------------- Lus10003123 (49)
| | |
| | | /------------- Lus10012545 (20)
| | \------------100-----------+
| | \------------- Lus10041548 (64)
| |
| | /------------- Lus10002763 (52)
| \-------------------75-------------------+
| \------------- Lus10011349 (56)
|
| /------------- Lus10042918 (2)
\-------------------------100-------------------------+
\------------- Lus10028214 (51)
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