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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Nicotiana benthamiana
M-type_MADS Family| Phylogenetic tree for domain ? help Back to Top |
|---|
Subtree rooted at node 159:
/----- Niben101Scf06551g00018.1/21-67 (2)
/----98---+
| \----- Niben101Scf01252g01009.1/11-58 (37)
|
| /---------- Niben101Scf07242g05005.1/9-58 (16)
| |
| | /----- Niben101Scf03026g01010.1/8-56 (33)
| |-100+
|-93-+ \----- Niben101Scf28369g01003.1/8-58 (70)
/----89----+ |
| | |---------- Niben101Scf04995g09003.1/10-58 (36)
| | |
| | \---------- Niben101Scf07242g05006.1/9-58 (76)
| |
| | /----- Niben101Scf06094g00010.1/9-59 (42)
| | /-100+
| | | \----- Niben101Scf04690g02040.1/67-108 (53)
| \-94-+
| | /----- Niben101Scf07034g05008.1/9-59 (63)
| \-56-+
| \----- Niben101Scf00063g10005.1/11-54 (64)
|
| /----- Niben101Scf00627g00003.1/9-59 (6)
|---------89---------+
| \----- Niben101Scf05552g06002.1/9-59 (12)
|
| /----- Niben101Scf00069g12019.1/10-59 (7)
| /----97---+
| | \----- Niben101Scf07073g00001.1/10-59 (91)
| |
| |--------------- Niben101Scf06517g00007.1/10-59 (14)
| |
| |--------------- Niben101Scf02348g12005.1/16-65 (31)
|----100---+
| | /----- Niben101Scf06863g01001.1/10-59 (52)
| | /-100+
| | | \----- Niben101Scf05483g07003.1/10-59 (80)
| | |
| \-59-+---------- Niben101Scf03671g03023.1/10-59 (55)
| |
| \---------- Niben101Scf00589g02008.1/10-59 (68)
|
| /----- Niben101Scf07508g01008.1/9-57 (11)
| |
| /-52-+----- Niben101Scf03488g12001.1/9-59 (21)
/------58------+ | |
| |-------95------+ \----- Niben101Scf00508g10011.1/9-61 (57)
| | |
| | \---------- Niben101Scf01327g01022.1/9-59 (41)
| |
| |-------------------------- Niben101Scf03670g00003.1/9-59 (13)
| |
| | /----- Niben101Scf02151g01003.1/10-46 (17)
| | /-100+
| | | \----- Niben101Scf01310g04011.1/10-56 (87)
| | |
| | /----100---+---------- Niben101Scf06076g00010.1/9-59 (29)
| | | |
| | | \---------- Niben101Scf04790g01013.1/9-59 (54)
| | |
| | | /----- Niben101Scf05618g05010.1/9-59 (24)
| | | |
| |-97-+ /-95-+----- Niben101Scf05620g02002.1/9-59 (84)
| | | | |
| | | | \----- Niben101Scf37484g00001.1/9-59 (98)
| | | /-74-+
| | | | |---------- Niben101Scf02151g01004.1/9-59 (40)
| | | | |
| | \--66-+ \---------- Niben101Scf01310g04008.1/9-59 (49)
| | |
| | \--------------- Niben101Scf02289g05016.1/9-59 (38)
| |
| | /----- Niben101Scf09778g00003.1/10-59 (43)
| | /-100+
| | | \----- Niben101Ctg15399g00001.1/10-59 (46)
| | |
| |-------95------+---------- Niben101Scf04021g02002.1/49-98 (89)
| | |
| | \---------- Niben101Scf08572g00002.1/10-59 (93)
| |
| \-------------------------- Niben101Scf07678g02010.1/25-75 (92)
|
| /---------- Niben101Scf06156g04011.1/17-62 (4)
| |
| | /----- Niben101Scf01124g07001.1/15-62 (30)
| /-99-+-100+
| | | \----- Niben101Scf06156g01002.1/15-62 (96)
| | |
| /--76-+ \---------- Niben101Scf05824g08001.1/15-62 (77)
| | |
| | \--------------- Niben101Scf00953g04019.1/18-63 (72)
| |
| /-99-+ /----- Niben101Scf04042g00013.1/16-63 (32)
| | | |
| | | |----- Niben101Scf04053g00001.1/16-63 (44)
| | \------100------+
| | |----- Niben101Scf07648g01024.1/16-63 (59)
| /----62---+ |
/-90-+ | | \----- Niben101Scf00953g04019.1/211-258 (73)
| | | |
| | | | /----- Niben101Scf01478g07007.1/24-71 (22)
| | | \---------100--------+
| | | \----- Niben101Scf03595g01005.1/24-71 (39)
| | |
| | | /----- Niben101Scf27304g00001.1/15-61 (8)
| | | |
| | | /-99-+----- Niben101Scf07207g00003.1/15-61 (81)
| | | | |
| | | | \----- Niben101Scf07207g00002.1/15-61 (90)
| | | /-------64------+
| | | | |---------- Niben101Scf02740g07006.1/15-59 (48)
| | | | |
| | | | \---------- Niben101Scf00837g03003.1/15-59 (95)
| | | |
| | | | /----- Niben101Scf02543g01002.1/16-63 (20)
| | | /-100+ /-100+
| | | | | | \----- Niben101Scf08039g00019.1/3-48 (86)
| | | | | /-86-+
| | | | | | \---------- Niben101Scf10287g01013.1/15-61 (61)
| | | | | /--66-+
| | | | | | \--------------- Niben101Scf01020g03001.1/71-116 (23)
| | |-76-+ \-91-+
| | | | \--------------------- Niben101Scf03048g05006.1/16-60 (60)
| |-93-+ |
| | | | /---------- Niben101Scf04053g03020.1/16-64 (15)
| | | | |
| | | \---------100--------+ /----- Niben101Scf03243g00004.1/16-62 (26)
| | | \-85-+
| | | \----- Niben101Scf08143g03018.1/16-64 (67)
| | |
| | | /---------- Niben101Scf00953g04018.1/16-56 (9)
/--89-+ | | |
| | | |-----------100-----------+ /----- Niben101Scf00953g03002.1/16-61 (34)
| | | | \-91-+
| | | | \----- Niben101Scf04053g00007.1/16-63 (50)
| | | |
| | | | /--------------------- Niben101Scf02060g00010.1/11-59 (28)
| | | | |
| | | | | /----- Niben101Scf04396g04001.1/12-58 (45)
| | | |------100-----+ /---100---+
| | | | | | \----- Niben101Scf09234g01005.1/2-39 (58)
| | | | | |
| | | | \--99-+ /---------- Niben101Scf01848g02010.1/2-39 (47)
| | | | | |
| | | | \-78-+ /----- Niben101Ctg13673g00002.1/11-58 (56)
| | | | \-75-+
| | | | \----- Niben101Scf02606g05030.1/11-58 (74)
| | | |
| | | \------------------------------------ Niben101Scf20949g00001.1/13-53 (69)
| | |
/-81-+ | \----------------------------------------- Niben101Scf09512g04021.1/9-57 (65)
| | |
| | | /----- Niben101Scf05962g00002.1/15-55 (5)
| | | |
| | |-------------------100------------------+----- Niben101Scf04234g00003.1/12-52 (25)
| | | |
| | | \----- Niben101Scf05962g00001.1/15-55 (83)
| | |
| | | /---------- Niben101Scf18356g00007.1/7-40 (18)
| | | |
| | | /-98-+ /----- Niben101Scf04921g01007.1/3-51 (71)
| | | | \-98-+
/-65-+ | | | \----- Niben101Scf04934g00005.1/3-47 (97)
| | | \--------------76--------------+
| | | |--------------- Niben101Scf05830g01017.1/22-50 (27)
| | | |
| | | \--------------- Niben101Scf00414g05014.1/10-50 (62)
| | |
| | | /----- Niben101Scf02909g03006.1/13-50 (88)
| | \----------------------100---------------------+
--100+ | \----- Niben101Scf04074g00008.1/14-50 (94)
| |
| | /----- Niben101Scf37475g00001.1/10-40 (35)
| \-------------------------61------------------------+
| \----- Niben101Scf03171g01002.1/10-50 (85)
|
| /----- Niben101Scf04197g01014.1/11-52 (10)
\---------------------------100--------------------------+
\----- Niben101Scf01711g01003.1/11-52 (79)
Root part of tree:
/------------------------------------------------------------------- Niben101Scf04614g07007.1/4-41 (1)
|
|------------------------------------------------------------------- Niben101Scf04684g02004.1/4-41 (66)
|
| /---------------------- Niben101Scf02108g02015.1/9-54 (3)
| |
| |---------------------- Niben101Scf02566g02010.1/2-26 (19)
| /----------100---------+
+ | |---------------------- Niben101Scf00472g02011.1/3-49 (75)
| | |
|----------95---------+ \---------------------- Niben101Scf01970g07019.1/2-26 (82)
| |
| \--------------------------------------------- Niben101Scf13505g02008.1/10-46 (51)
|
| /---------------------- (159)
\---------------------69---------------------+
\---------------------- Niben101Scf05102g08002.1/4-42 (78)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 171:
/----- Niben101Scf04684g02004.1 (2)
/-60-+
| \----- Niben101Scf04614g07007.1 (76)
/------100------+
| \---------- Niben101Scf05102g08002.1 (37)
|
| /--------------- Niben101Scf02566g02010.1 (31)
/-93-+ |
| | /-100-+ /---------- Niben101Scf00472g02011.1 (32)
| | | | |
| | | \-50-+ /----- Niben101Scf01970g07019.1 (67)
| \-89-+ \-86-+
/-94-+ | \----- Niben101Scf02108g02015.1 (75)
| | |
| | \--------------------- Niben101Scf13505g02008.1 (39)
| |
| | /----- Niben101Scf04197g01014.1 (82)
/-51-+ \-----------100-----------+
| | \----- Niben101Scf01711g01003.1 (92)
| |
| | /----- Niben101Scf04074g00008.1 (4)
/-95-+ \--------------100-------------+
| | \----- Niben101Scf02909g03006.1 (93)
| |
| | /----- Niben101Scf03171g01002.1 (18)
| \----------------100----------------+
| \----- Niben101Scf37475g00001.1 (34)
|
/--95-+ /----- Niben101Scf04921g01007.1 (21)
| | /-100+
| | | \----- Niben101Scf04934g00005.1 (47)
| | /-100+
| | | \---------- Niben101Scf18356g00007.1 (36)
| | /--92-+
| | | \--------------- Niben101Scf00414g05014.1 (50)
| \-----------100----------+
| \--------------------- Niben101Scf05830g01017.1 (46)
|
| /---------- Niben101Scf37484g00001.1 (3)
| |
| /-86-+ /----- Niben101Scf05620g02002.1 (6)
| | \-91-+
| /--84-+ \----- Niben101Scf05618g05010.1 (60)
| | |
| /-58-+ \--------------- Niben101Scf01310g04008.1 (41)
| | |
| /----58---+ \--------------------- Niben101Scf02151g01004.1 (84)
| | |
| | \-------------------------- Niben101Scf02289g05016.1 (19)
| |
| | /----- Niben101Scf28369g01003.1 (5)
| | /---100---+
| | | \----- Niben101Scf03026g01010.1 (65)
| | |
| | | /----- Niben101Scf06551g00018.1 (51)
| | /--58-+ /-100+
| | | | | \----- Niben101Scf01252g01009.1 (56)
| | | | |
| | | \-100+ /----- Niben101Scf07242g05006.1 (54)
| | | | |
| |------63------+ \-91-+----- Niben101Scf07242g05005.1 (58)
| | | |
| | | \----- Niben101Scf04995g09003.1 (62)
| | |
| | | /----- Niben101Scf06094g00010.1 (17)
| | \------100------+
| | \----- Niben101Scf04690g02040.1 (78)
| |
| | /----- Niben101Scf05552g06002.1 (7)
| |--------------89--------------+
| | \----- Niben101Scf00627g00003.1 (94)
| |
| |------------------------------------ Niben101Scf03670g00003.1 (8)
| |
| | /---------- Niben101Scf07508g01008.1 (10)
| | |
| | /-52-+ /----- Niben101Scf03488g12001.1 (71)
| | | \-86-+
| |---------71---------+ \----- Niben101Scf00508g10011.1 (86)
| | |
| | \--------------- Niben101Scf01327g01022.1 (16)
| |
|-------95------+ /----- Niben101Scf02348g12005.1 (11)
| | /-84-+
| | | \----- Niben101Scf06517g00007.1 (20)
| | /-51-+
| | | | /----- Niben101Scf05483g07003.1 (24)
| | | \-100+
| | /--91-+ \----- Niben101Scf06863g01001.1 (29)
| | | |
| | | | /----- Niben101Scf03671g03023.1 (48)
| | /-84-+ \----71---+
| | | | \----- Niben101Scf00589g02008.1 (90)
| | | |
| | /-89-+ \--------------------- Niben101Scf00069g12019.1 (25)
| | | |
| |-55-+ \-------------------------- Niben101Scf07073g00001.1 (72)
| | |
| | \------------------------------- Niben101Scf07034g05008.1 (70)
| |
/-74-+ | /----- Niben101Scf01310g04011.1 (26)
| | | /-100+
| | | | \----- Niben101Scf02151g01003.1 (38)
| | |------------92-----------+
| | | | /----- Niben101Scf04790g01013.1 (30)
| | | \-73-+
| | | \----- Niben101Scf06076g00010.1 (59)
| | |
| | |------------------------------------ Niben101Scf00063g10005.1 (28)
| | |
| | | /----- Niben101Ctg15399g00001.1 (42)
| | | /-98-+
| | | | \----- Niben101Scf09778g00003.1 (52)
| | |------------97-----------+
| | | | /----- Niben101Scf08572g00002.1 (49)
| | | \-72-+
| | | \----- Niben101Scf04021g02002.1 (53)
| | |
| | \------------------------------------ Niben101Scf07678g02010.1 (91)
| |
| | /---------- Niben101Scf10287g01013.1 (12)
| | |
| | /-100+ /----- Niben101Scf02543g01002.1 (61)
| | | \-100+
| | | \----- Niben101Scf08039g00019.1 (88)
| | /----100---+
| | | | /----- Niben101Scf03048g05006.1 (43)
| | | \---100---+
| | | \----- Niben101Scf01020g03001.1 (57)
| | |
| | | /----- Niben101Scf07207g00003.1 (35)
| |-----------100-----------+ /-95-+
| | | | \----- Niben101Scf07207g00002.1 (95)
| | | /-100+
| | | | \---------- Niben101Scf27304g00001.1 (87)
| | | /-100-+
| | | | \--------------- Niben101Scf02740g07006.1 (69)
| | \-100+
/-74-+ | \--------------------- Niben101Scf00837g03003.1 (45)
| | |
| | | /-------------------------- Niben101Scf09512g04021.1 (14)
| | | |
| | | | /--------------------- Niben101Scf02060g00010.1 (27)
| | | | |
| | | | | /----- Niben101Scf02606g05030.1 (33)
| | | | | /-100+
| | | |-100+ | \----- Niben101Ctg13673g00002.1 (83)
| | | | | /-99-+
| | |------------58-----------+ | | \---------- Niben101Scf01848g02010.1 (79)
| | | | \--64-+
| | | | | /----- Niben101Scf09234g01005.1 (44)
| | | | \----89---+
| | | | \----- Niben101Scf04396g04001.1 (80)
| | | |
| | | | /---------- Niben101Scf00953g04018.1 (63)
| | | | |
| | | \------100------+ /----- Niben101Scf04053g00007.1 (68)
| | | \-51-+
| | | \----- Niben101Scf00953g03002.1 (96)
| | |
| | | /----- Niben101Scf08143g03018.1 (15)
--100+ | | |
| | |----------------------100---------------------+----- Niben101Scf03243g00004.1 (22)
| | | |
| | | \----- Niben101Scf04053g03020.1 (81)
| | |
| | | /----- Niben101Scf04234g00003.1 (40)
| | | |
| | |----------------------100---------------------+----- Niben101Scf05962g00002.1 (66)
| | | |
| | | \----- Niben101Scf05962g00001.1 (85)
| | |
| | \---------------------------------------------------- Niben101Scf20949g00001.1 (55)
| |
| | /--------------- Niben101Scf00953g04019.1 (13)
| | |
| \-------------------100-------------------+ /---------- Niben101Scf07648g01024.1 (64)
| | |
| \-100+ /----- Niben101Scf04042g00013.1 (74)
| \-97-+
| \----- Niben101Scf04053g00001.1 (97)
|
| /----- Niben101Scf01478g07007.1 (9)
\---------------------------100--------------------------+
\----- Niben101Scf03595g01005.1 (77)
Root part of tree:
/------------------------------------------------------------------- Niben101Scf05824g08001.1 (1)
|
|------------------------------------------------------------------- Niben101Scf06156g04011.1 (73)
+
| /--------------------------------------------- (171)
| |
\---------100---------+ /---------------------- Niben101Scf06156g01002.1 (23)
\----------100---------+
\---------------------- Niben101Scf01124g07001.1 (89)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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