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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Raphanus raphanistrum
M-type_MADS Family| Phylogenetic tree for domain ? help Back to Top |
|---|
Subtree rooted at node 130:
/---------- RrC2055_p5/18-64 (3)
|
/-66-+ /----- RrC17785_p1/10-53 (29)
| \-91-+
/--84-+ \----- RrC12115_p1/19-61 (71)
| |
| \--------------- RrC10807_p2/11-57 (59)
|
/--------------52--------------+ /----- RrC6079_p1/51-99 (22)
| | /-91-+
| | | \----- RrC3265_p1/50-98 (37)
| | |
| \----97----+---------- RrC3079_p2/51-99 (57)
| |
| \---------- RrC841_p5/36-84 (61)
|
| /----- RrC42715_p1/37-68 (4)
| /-53-+
| | \----- RrC36717_p1/35-66 (16)
| |
| /-100+ /----- RrC2482_p5/27-68 (6)
| | | |
| | \-57-+----- RrC4360_p1/1-27 (33)
| | |
| | \----- RrC11525_p1/38-69 (55)
| /----88----+
| | | /----- RrC23437_p2/14-54 (42)
| | | /-100+
| | | | \----- RrC27450_p1/12-54 (75)
| | \-97-+
| | | /----- RrC28432_p1/22-63 (73)
| | \-99-+
| /-100+ \----- RrC26244_p1/25-65 (77)
| | |
| | | /----- RrC6340_p3/27-72 (18)
| | | |
| | | /-------54------+----- RrC2096_p5/21-58 (47)
| | | | |
| | | | \----- RrC370_p4/35-80 (49)
| | \-98-+
| /-51-+ | /--------------- RrC6078_p4/6-55 (27)
| | | | |
| | | \--99-+ /---------- RrC578_p3/16-64 (62)
| | | | |
| | | \-100+ /----- RrC4790_p1/15-61 (69)
| | | \-71-+
| | | \----- RrC877_p4/35-83 (74)
| | |
| | \------------------------------- RrC9040_p1/10-60 (39)
| |
| | /----- RrC4073_p2/10-50 (7)
| | /------100------+
| | | \----- RrC5887_p3/10-49 (44)
| | |
| | | /----- RrC12469_p1/11-50 (9)
| | | /-99-+
| | | | \----- RrC5951_p2/10-50 (70)
/-100+ | | /-97-+
| | | | | \---------- RrC19294_p1/11-52 (41)
| | | |--55-+
| | | | \--------------- RrC4247_p1/10-58 (14)
| | | |
| | /-85-+ | /----- RrC21298_p1/10-50 (20)
| | | | | |
| | | | | /-100+----- RrC9497_p1/10-40 (30)
| | | | | | |
| | | |------68------+ /-54-+ \----- RrC23124_p1/10-51 (72)
| | | | | | |
| | | | |--98-+ \---------- RrC9299_p1/10-50 (64)
| | | | | |
| | | | | \--------------- RrC7195_p3/10-50 (51)
| | | | |
| | | | | /----- RrC29350_p1/11-52 (28)
| | | | | /-99-+
| | /-95-+ | | | \----- RrC3302_p3/11-52 (36)
| | | | | |----53----+
| | | | | | \---------- RrC3302_p4/2-29 (58)
| | | | | |
| | | | | |--------------------- RrC1763_p1/10-51 (34)
| | | | | |
| | | | | \--------------------- RrC7133_p1/10-50 (65)
| | | | |
| | | | | /----- RrC6527_p1/11-53 (12)
| | | | \--------------100-------------+
| | | | \----- RrC1970_p2/10-51 (54)
| | | |
| | | \----------------------------------------- RrC1183_p2/12-52 (63)
| | |
| | | /----- RrC8749_p1/9-53 (5)
| | | /----63---+
| | | | \----- RrC212_p4/9-53 (52)
| | | |
| | |--------------61--------------+ /---------- RrC4249_p1/2-40 (23)
| | | | |
| | | \-50-+ /----- RrC13838_p1/3-41 (31)
| | | \-100+
| | | \----- RrC3291_p2/4-51 (66)
| | |
/-64-+ | | /----- RrC1783_p2/1-31 (8)
| | | |-------------------64-------------------+
| | | | \----- RrC39330_p1/9-59 (78)
| | | |
| | | | /----- RrC12830_p1/44-79 (13)
| | | | /-100+
| | | | | \----- RrC9964_p1/58-93 (35)
| | \--61-+ |
| | | /-97-+---------- RrC7993_p2/9-55 (21)
| | | | |
| | |--------------92--------------+ \---------- RrC7993_p1/9-55 (60)
| | | |
| | | \--------------- RrC10931_p2/9-59 (24)
| | |
| | | /----- RrC4032_p4/9-59 (17)
| | | /-89-+
| | | | \----- RrC4841_p1/9-59 (48)
| | | /-88-+
| | | | \---------- RrC24709_p1/9-59 (79)
| | |--------------88--------------+
| | | \--------------- RrC19123_p1/9-59 (19)
| | |
| | | /----- RrC5014_p1/9-59 (26)
--85-+ | | |
| | | /-58-+----- RrC20252_p1/24-74 (38)
| | | | |
| | | | \----- RrC9579_p1/9-58 (53)
| | | /-51-+
| | | | |---------- RrC27859_p1/9-59 (40)
| | | | |
| | |--------------50--------------+ \---------- RrC1496_p1/9-59 (43)
| | | |
| | | \--------------- RrC22842_p1/9-59 (32)
| | |
| | |---------------------------------------------- RrC30821_p1/9-59 (56)
| | |
| | |---------------------------------------------- RrC3851_p1/9-59 (68)
| | |
| | \---------------------------------------------- RrC6091_p1/10-59 (76)
| |
| | /----- RrC6615_p2/11-49 (11)
| \------------------------100------------------------+
| \----- RrC688_p6/12-49 (50)
|
|-------------------------------------------------------------- RrC3377_p2/16-56 (25)
|
\-------------------------------------------------------------- RrC13371_p1/13-50 (46)
Root part of tree:
/------------------------------------------------------------------- RrC8572_p1/15-52 (1)
|
| /---------------------- (130)
| /----------99----------+
| | \---------------------- RrC13082_p1/14-53 (67)
|----------63---------+
+ \--------------------------------------------- RrC5633_p4/15-52 (45)
|
| /---------------------- RrC38630_p1/3-41 (2)
| /----------64----------+
| | \---------------------- RrC12231_p5/15-53 (15)
\----------57---------+
\--------------------------------------------- RrC49560_p1/5-35 (10)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
/------------------------------------------------------------------- RrC6527_p1 (1)
|
|------------------------------------------------------------------- RrC1970_p2 (69)
|
| /-------------------------------------------------- RrC8749_p1 (2)
| |
| | /------ RrC1496_p1 (3)
| | /-97-+
| | | \------ RrC27859_p1 (54)
| |------------------100-----------------+
| | \----------- RrC22842_p1 (47)
| |
| | /------ RrC4841_p1 (4)
| | |
| | /-80-+------ RrC4032_p4 (15)
| | | |
| |------------------97------------------+ \------ RrC24709_p1 (63)
| | |
| | \----------- RrC19123_p1 (50)
| |
| | /----------------- RrC38630_p1 (5)
| | |
| | /-99-+ /----------- RrC12231_p5 (25)
| | | | |
| | | \--85-+ /------ RrC5633_p4 (35)
| | /--99-+ \-85-+
| | | | \------ RrC8572_p1 (44)
| | | |
| | /-94-+ \---------------------- RrC49560_p1 (56)
| | | |
| | | | /------ RrC13371_p1 (14)
| | /--71-+ \----------82---------+
| | | | \------ RrC13082_p1 (58)
| | | |
| | /-100-+ \--------------------------------- RrC3377_p2 (77)
| | | |
| | | | /------ RrC6615_p2 (38)
| | | \---------------100--------------+
| | | \------ RrC688_p6 (43)
| | |
| | | /----------- RrC841_p5 (24)
| | | |
| | | /--99-+ /------ RrC3265_p1 (39)
| |-52-+ | \-82-+
| | | /-99-+ \------ RrC6079_p1 (68)
| | | | |
| /----98----+ | | \----------------- RrC3079_p2 (51)
| | | | /--71-+
| | | | | | /----------- RrC2055_p5 (41)
| | | | | | |
+ | | | | \----100---+ /------ RrC12115_p1 (61)
| | | \-------84-------+ \-100+
| | | | \------ RrC17785_p1 (74)
| | | |
| | | | /------ RrC10807_p2 (60)
| | | \----------97---------+
| | | \------ RrC4249_p1 (73)
| | |
| | |-------------------------------------------------- RrC20252_p1 (7)
| | |
| | |-------------------------------------------------- RrC6091_p1 (8)
| | |
| | |-------------------------------------------------- RrC5014_p1 (9)
| | |
| | | /---------------------- RrC10931_p2 (17)
| | | |
| | | | /------ RrC9964_p1 (29)
| | | | /-100+
| | |-------------86------------+ | \------ RrC12830_p1 (59)
| | | | /--56-+
| | | | | \----------- RrC7993_p2 (32)
| | | \-85-+
| | | \----------------- RrC7993_p1 (62)
| | |
| | | /------ RrC13838_p1 (21)
| | |--------------------100--------------------+
| | | \------ RrC3291_p2 (36)
| | |
| | |-------------------------------------------------- RrC3851_p1 (30)
| | |
| | |-------------------------------------------------- RrC1783_p2 (40)
| | |
| | |-------------------------------------------------- RrC212_p4 (42)
| | |
| | |-------------------------------------------------- RrC9579_p1 (45)
| | |
| | |-------------------------------------------------- RrC39330_p1 (49)
| | |
| | \-------------------------------------------------- RrC30821_p1 (72)
| |
| | /------ RrC4360_p1 (6)
| | |
| | |------ RrC36717_p1 (11)
| | |
| | /----100---+------ RrC11525_p1 (67)
| | | |
| | | |------ RrC42715_p1 (76)
| | | |
| | | \------ RrC2482_p5 (78)
\-100-+ /----100---+
| | | /------ RrC28432_p1 (12)
| | | /-100+
| | | | \------ RrC26244_p1 (33)
| | \-100-+
| | | /------ RrC27450_p1 (65)
| | \-100+
| | \------ RrC23437_p2 (79)
|---------------100--------------+
| | /------ RrC2096_p5 (13)
| | /-100+
| | | \------ RrC370_p4 (37)
| | /----100---+
| | | \----------- RrC6340_p3 (26)
| | |
| | | /----------- RrC578_p3 (19)
| \-100-+ |
| | /-100-+ /------ RrC877_p4 (22)
| | | \-55-+
| \-100+ \------ RrC4790_p1 (46)
| |
| \----------------- RrC6078_p4 (71)
|
| /------ RrC4247_p1 (10)
| /---------------100--------------+
| | \------ RrC19294_p1 (70)
| |
| | /---------------------- RrC7195_p3 (18)
| | |
| | | /----------- RrC9497_p1 (27)
| | /-100-+ |
| /--50-+ | | /-100-+ /------ RrC21298_p1 (48)
| | | | | | \-58-+
| | | | \-100+ \------ RrC23124_p1 (57)
| | | /-77-+ |
| | | | | \----------------- RrC9299_p1 (55)
| | | | |
| | | | | /------ RrC7133_p1 (20)
| | \--99-+ \---------100---------+
| /-80-+ | \------ RrC1763_p1 (31)
| | | |
| | | | /------ RrC5887_p3 (23)
| | | \------------100-----------+
| | | \------ RrC4073_p2 (66)
| | |
| | | /------ RrC12469_p1 (64)
| /--56-+ \------------------100-----------------+
| | | \------ RrC5951_p2 (75)
| | |
| | | /------ RrC29350_p1 (28)
| | | /-100+
| | | | \------ RrC3302_p3 (34)
\-76-+ \------------------62------------------+
| \----------- RrC3302_p4 (52)
|
|-------------------------------------------------------- RrC9040_p1 (16)
|
\-------------------------------------------------------- RrC1183_p2 (53)
|
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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