 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Raphanus sativus
M-type_MADS Family| Phylogenetic tree for domain ? help Back to Top |
|---|
Subtree rooted at node 171:
/---------- Rsa1.0_10498.1_g00001.1/10-50 (2)
|
|---------- Rsa1.0_13392.1_g00001.1/10-50 (4)
|
| /----- Rsa1.0_07715.1_g00001.1/10-50 (8)
|-95-+
| \----- Rsa1.0_07715.1_g00002.1/10-50 (71)
|
| /----- Rsa1.0_23673.1_g00001.1/10-50 (18)
| |
|-59-+----- Rsa1.0_11422.1_g00002.1/10-50 (34)
| |
| \----- Rsa1.0_13724.1_g00002.1/10-50 (95)
|
|---------- Rsa1.0_23278.1_g00001.1/10-50 (23)
/-99-+
| |---------- Rsa1.0_11408.1_g00001.1/10-50 (38)
| |
| |---------- Rsa1.0_13724.1_g00003.1/22-47 (43)
| |
| | /----- Rsa1.0_18257.1_g00002.1/10-50 (48)
| | |
| | |----- Rsa1.0_24109.1_g00001.1/10-50 (67)
| |-51-+
/-70-+ | |----- Rsa1.0_16113.1_g00002.1/10-52 (93)
| | | |
| | | \----- Rsa1.0_22149.1_g00001.1/10-50 (170)
| | |
| | |---------- Rsa1.0_12282.1_g00001.1/10-50 (66)
/-------------------99-------------------+ | |
| | | \---------- Rsa1.0_03526.1_g00003.1/10-50 (150)
| | |
| | \--------------- Rsa1.0_00694.1_g00006.1/10-50 (72)
| |
| \-------------------- Rsa1.0_00420.1_g00008.1/10-50 (29)
|
| /----- Rsa1.0_10740.1_g00001.1/9-59 (3)
| /---------99--------+
| | \----- Rsa1.0_01359.1_g00005.1/9-59 (39)
| |
| | /-------------------- Rsa1.0_00248.1_g00021.1/9-59 (7)
| | |
| | | /----- Rsa1.0_05241.1_g00003.1/24-74 (17)
| | | /-78-+
| | | | \----- Rsa1.0_07505.1_g00001.1/24-74 (50)
| | | /-99-+
| | | | \---------- Rsa1.0_02433.1_g00012.1/24-74 (190)
| | |-100+
| | | \--------------- Rsa1.0_04195.1_g00003.1/22-72 (46)
| |-74-+
| | | /----- Rsa1.0_19534.1_g00001.1/9-58 (32)
| /------------58-----------+ | /-51-+
| | | | | \----- Rsa1.0_36951.1_g00001.1/9-58 (61)
| | | | /-99-+
| | | | | \---------- Rsa1.0_26510.1_g00001.1/9-58 (94)
| | | |-71-+
| | | | \--------------- Rsa1.0_18284.1_g00001.1/10-58 (44)
| | | |
| | | \-------------------- Rsa1.0_00040.1_g00037.1/9-59 (113)
| | |
| | |------------------------- Rsa1.0_05340.1_g00003.1/9-59 (15)
| | |
| | | /----- Rsa1.0_00073.1_g00002.1/9-55 (110)
| | | /-69-+
| | | | \----- Rsa1.0_02553.1_g00002.1/44-83 (130)
| | \------100-----+
| | \---------- Rsa1.0_00022.1_g00002.1/9-56 (110)
| |
| | /----- Rsa1.0_00041.1_g00013.1/15-62 (5)
| | /-69-+
| | | \----- Rsa1.0_05374.1_g00001.1/3-41 (49)
| | /-100+
| | | \---------- Rsa1.0_00087.1_g00110.1/14-62 (111)
| |-----------------93----------------+
| | | /----- Rsa1.0_02405.1_g00007.1/1-38 (69)
| | \---100---+
| | \----- Rsa1.0_02405.1_g00006.1/2-40 (112)
| |
| | /----- Rsa1.0_00095.1_g00022.1/14-51 (6)
| | /-100+
| | | \----- Rsa1.0_00095.1_g00006.1/14-51 (42)
| | /-84-+
| | | \---------- Rsa1.0_00362.1_g00007.1/22-56 (90)
| | /-100+
| | | \--------------- Rsa1.0_00818.1_g00004.1/23-52 (80)
| | |
| | |-------------------- Rsa1.0_00887.1_g00007.1/15-53 (65)
| | /-58-+
| | | |-------------------- Rsa1.0_01854.1_g00005.1/15-53 (86)
| | | |
| | | \-------------------- Rsa1.0_07319.1_g00001.1/15-53 (97)
| | /-99-+
| | | |------------------------- Rsa1.0_00769.1_g00002.1/15-53 (47)
| | | |
| | /--71-+ \------------------------- Rsa1.0_00134.1_g00010.1/15-52 (96)
| | | |
| | | | /----- Rsa1.0_00072.1_g00017.1/14-53 (40)
| | /-91-+ \-----------100----------+
| | | | \----- Rsa1.0_37341.1_g00001.1/14-53 (140)
| | | |
| | | \------------------------------------ Rsa1.0_11288.1_g00002.1/1-29 (33)
| | |
| /-80-+ /-99-+ /----- Rsa1.0_02758.1_g00002.1/12-49 (20)
| | | | |----------------100----------------+
| | | | | \----- Rsa1.0_03102.1_g00002.1/11-49 (180)
| | | | |
| | | | \----------------------------------------- Rsa1.0_00730.1_g00002.1/16-55 (89)
| | | |
--99-+ | |-74-+ /----- Rsa1.0_00060.1_g00025.1/50-98 (21)
| | | | /-94-+
| | | | | \----- Rsa1.0_04034.1_g00004.1/52-100 (35)
| | | | /-70-+
| | | | | \---------- Rsa1.0_00139.1_g00034.1/81-129 (45)
| | | \--------------100-------------+
| | | \--------------- Rsa1.0_06027.1_g00002.1/51-99 (55)
| | |
| | | /---------- Rsa1.0_02588.1_g00007.1/18-65 (9)
| | | |
| | |-------------------98-------------------+ /----- Rsa1.0_00122.1_g00026.1/10-53 (22)
| | | \-100+
| | | \----- Rsa1.0_10151.1_g00001.1/19-61 (31)
| | |
| | | /----- Rsa1.0_01437.1_g00004.1/5-50 (13)
| | | /----99---+
| | | | \----- Rsa1.0_01437.1_g00002.1/5-50 (68)
| | | |
| | |-----------------76----------------+ /---------- Rsa1.0_04281.1_g00001.1/16-62 (16)
| | | | |
| | | \-71-+ /----- Rsa1.0_02599.1_g00003.1/17-62 (53)
|-77-+ | \-100+
| | | \----- Rsa1.0_03429.1_g00003.1/4-50 (54)
| | |
| | | /----- Rsa1.0_00111.1_g00068.1/12-57 (25)
| | |----------------------83---------------------+
| | | \----- Rsa1.0_13506.1_g00002.1/11-57 (30)
| | |
| | | /----- Rsa1.0_01360.1_g00011.1/9-53 (28)
| | | /-89-+
| | | | \----- Rsa1.0_00038.1_g00008.1/51-94 (75)
| | |-------------------98-------------------+
| | | | /----- Rsa1.0_00015.1_g00081.1/9-32 (62)
| | | \-100+
| | | \----- Rsa1.0_02019.1_g00002.1/9-53 (99)
| | |
| | | /----- Rsa1.0_00826.1_g00011.1/1-31 (60)
| | |----------------------95---------------------+
| | | \----- Rsa1.0_02554.1_g00004.1/9-37 (120)
| | |
| | |--------------------------------------------------- Rsa1.0_00607.1_g00004.1/11-53 (77)
| | |
| | |--------------------------------------------------- Rsa1.0_00160.1_g00025.1/9-57 (81)
| | |
| | \--------------------------------------------------- Rsa1.0_23774.1_g00001.1/9-59 (88)
| |
| |-------------------------------------------------------- Rsa1.0_02169.1_g00002.1/10-49 (14)
| |
| \-------------------------------------------------------- Rsa1.0_00044.1_g00052.1/10-50 (19)
|
| /----- Rsa1.0_01943.1_g00008.1/11-60 (10)
|---------------------------79--------------------------+
| \----- Rsa1.0_01654.1_g00004.1/10-60 (73)
|
| /----- Rsa1.0_00293.1_g00003.1/10-58 (11)
| /---100---+
| | \----- Rsa1.0_00293.1_g00005.1/10-58 (87)
| |
|----------------------62---------------------+ /----- Rsa1.0_01533.1_g00002.1/10-50 (24)
| | /-100+
| | | \----- Rsa1.0_00433.1_g00001.1/11-50 (64)
| \-84-+
| \---------- Rsa1.0_00044.1_g00049.1/11-52 (100)
|
|------------------------------------------------------------- Rsa1.0_00317.1_g00004.1/10-51 (58)
|
| /---------- Rsa1.0_00420.1_g00007.1/11-50 (70)
| |
|------------------------94------------------------+ /----- Rsa1.0_03097.1_g00002.1/11-52 (83)
| \-93-+
| \----- Rsa1.0_00896.1_g00015.1/11-52 (114)
|
| /----- Rsa1.0_01744.1_g00001.1/16-58 (74)
|--------------------------100--------------------------+
| \----- Rsa1.0_00233.1_g00006.1/10-51 (79)
|
|------------------------------------------------------------- Rsa1.0_01440.1_g00008.1/12-52 (78)
|
\------------------------------------------------------------- Rsa1.0_01426.1_g00007.1/10-50 (160)
Root part of tree:
/------------------------------------------------------------------ Rsa1.0_35331.1_g00001.1/22-66 (1)
|
|------------------------------------------------------------------ Rsa1.0_04196.1_g00001.1/35-66 (57)
|
| /--------------------------------------------------- (171)
| |
| | /------------------------------------- Rsa1.0_00073.1_g00025.1/6-55 (12)
| | |
| | | /----------------------------- Rsa1.0_03930.1_g00002.1/11-58 (27)
| | /--97--+ |
| /---72--+ | | | /--------------- Rsa1.0_00802.1_g00014.1/15-61 (41)
| | | | | | |
| | | | \--100--+ /--57--+ /------- Rsa1.0_08500.1_g00001.1/12-58 (63)
| | | | | | \---70--+
| | | | | | \------- Rsa1.0_01989.1_g00006.1/14-62 (84)
| | | | \--59--+
| | \--98--+ |---------------------- Rsa1.0_00516.1_g00016.1/14-62 (91)
| | | |
| | | \---------------------- Rsa1.0_04489.1_g00005.1/33-80 (92)
| | |
+--95--+ | /------- Rsa1.0_00279.1_g00020.1/26-71 (36)
| | | |
| | \-----------------57-----------------+------- Rsa1.0_03316.1_g00003.1/35-80 (52)
| | |
| | \------- Rsa1.0_07073.1_g00002.1/20-57 (115)
| |
| | /------- Rsa1.0_03662.1_g00003.1/23-56 (26)
| | /---96--+
| | | \------- Rsa1.0_00089.1_g00022.1/22-63 (98)
| | |
| \---------------------97--------------------+ /------- Rsa1.0_00181.1_g00021.1/11-53 (59)
| | |
| \---97--+------- Rsa1.0_05509.1_g00003.1/12-56 (76)
| |
| \------- Rsa1.0_00079.1_g00026.1/15-60 (82)
|
| /------- Rsa1.0_03276.1_g00003.1/24-67 (37)
| |
| |------- Rsa1.0_09034.1_g00001.1/1-27 (51)
\----------------------------78----------------------------+
|------- Rsa1.0_01844.1_g00002.1/27-68 (56)
|
\------- Rsa1.0_07424.1_g00001.1/187-215 (85)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
/------------------------------------------------------------------ Rsa1.0_10740.1_g00001.1 (1)
|
|------------------------------------------------------------------ Rsa1.0_01359.1_g00005.1 (49)
|
| /----- Rsa1.0_00122.1_g00026.1 (2)
| /-100+
| | \----- Rsa1.0_10151.1_g00001.1 (65)
| /---100---+
| | \---------- Rsa1.0_02588.1_g00007.1 (37)
| |
| | /----- Rsa1.0_01437.1_g00002.1 (5)
| /--------------80--------------+ /-99-+
| | | | \----- Rsa1.0_01437.1_g00004.1 (66)
| | | /-91-+
| | | | \---------- Rsa1.0_04281.1_g00001.1 (15)
| | \-95-+
| | | /----- Rsa1.0_03429.1_g00003.1 (9)
| | \---100---+
| | \----- Rsa1.0_02599.1_g00003.1 (70)
| |
| | /---------------------------------------------- Rsa1.0_00730.1_g00002.1 (7)
| | |
| | | /----- Rsa1.0_03102.1_g00002.1 (10)
| | | /----------------100----------------+
| | | | \----- Rsa1.0_02758.1_g00002.1 (85)
| | | |
| | | | /---------- Rsa1.0_00769.1_g00002.1 (28)
| |-91-+ | |
| | | | /-78-+ /----- Rsa1.0_00134.1_g00010.1 (35)
| | | | | \-100+
| | | | /-100+ \----- Rsa1.0_07319.1_g00001.1 (114)
| | | | | |
| | | | /-100+ \--------------- Rsa1.0_01854.1_g00005.1 (90)
| | | | | |
| | \-97-+ | \-------------------- Rsa1.0_00887.1_g00007.1 (91)
| | | /-99-+
| | | | | /----- Rsa1.0_37341.1_g00001.1 (46)
| | | | \--------100--------+
| | | | \----- Rsa1.0_00072.1_g00017.1 (78)
| | | /--99-+
| | | | | /----- Rsa1.0_00095.1_g00006.1 (40)
| | | | | /-100+
| /-62-+ | | | | \----- Rsa1.0_00095.1_g00022.1 (82)
| | | | | \--------100--------+
| | | \-56-+ | /----- Rsa1.0_00362.1_g00007.1 (64)
| | | | \-100+
| | | | \----- Rsa1.0_00818.1_g00004.1 (100)
| | | |
| | | \------------------------------------ Rsa1.0_11288.1_g00002.1 (150)
| | |
| | | /---------- Rsa1.0_00087.1_g00110.1 (14)
| | | |
| | |-------------------99-------------------+ /----- Rsa1.0_05374.1_g00001.1 (20)
| | | \-97-+
| | | \----- Rsa1.0_00041.1_g00013.1 (36)
| | |
| | | /----- Rsa1.0_02405.1_g00007.1 (29)
| | |---------------------100---------------------+
| | | \----- Rsa1.0_02405.1_g00006.1 (63)
| | |
| | | /----- Rsa1.0_00607.1_g00004.1 (30)
| | |----------------------91---------------------+
| | | \----- Rsa1.0_00160.1_g00025.1 (80)
| | |
| | | /--------------- Rsa1.0_06027.1_g00002.1 (31)
| | | |
| | |----------------100----------------+ /---------- Rsa1.0_00139.1_g00034.1 (68)
| | | | |
| | | \-100+ /----- Rsa1.0_04034.1_g00004.1 (92)
| | | \-78-+
| | | \----- Rsa1.0_00060.1_g00025.1 (93)
| | |
| | | /----- Rsa1.0_00111.1_g00068.1 (170)
| | \---------------------100---------------------+
| | \----- Rsa1.0_13506.1_g00002.1 (115)
| |
| | /----- Rsa1.0_01533.1_g00002.1 (3)
| | /---100---+
| | | \----- Rsa1.0_00433.1_g00001.1 (140)
| | |
| | | /----- Rsa1.0_03097.1_g00002.1 (11)
| | | /-100+
| | | | \----- Rsa1.0_00896.1_g00015.1 (62)
| | |-100+
| | | \---------- Rsa1.0_00420.1_g00007.1 (25)
| | /------------58-----------+
| | | | /----- Rsa1.0_00293.1_g00003.1 (34)
+ | | | /-100+
| | | | | \----- Rsa1.0_00293.1_g00005.1 (42)
| | | |-98-+
| | | | \---------- Rsa1.0_00044.1_g00049.1 (76)
| | | |
| | | | /----- Rsa1.0_00044.1_g00052.1 (75)
| | | \---100---+
| | | \----- Rsa1.0_02169.1_g00002.1 (86)
| | |
| | | /----- Rsa1.0_01426.1_g00007.1 (6)
| | | /--------------100-------------+
| | | | \----- Rsa1.0_00317.1_g00004.1 (16)
| | /-100+ |
| | | | | /----- Rsa1.0_23673.1_g00001.1 (8)
| | | | | /------86------+
| | | | | | \----- Rsa1.0_13724.1_g00003.1 (23)
| | | | | |
| | | | | | /----- Rsa1.0_16113.1_g00002.1 (12)
| | | | | | |
| | | | | | |----- Rsa1.0_11408.1_g00001.1 (13)
| | | | | | /----67---+
| | | | | | | |----- Rsa1.0_23278.1_g00001.1 (51)
| | | | | | | |
| | | | | | | \----- Rsa1.0_13724.1_g00002.1 (113)
| | | | | |-97-+
| | | | | | | /----- Rsa1.0_12282.1_g00001.1 (44)
| | | \-87-+ | | /-100+
| | | | | | | \----- Rsa1.0_03526.1_g00003.1 (190)
| | | | /-100+ \-92-+
| | | | | | \---------- Rsa1.0_18257.1_g00002.1 (74)
| /-95-+ | | | |
| | | | | | |-------------------- Rsa1.0_10498.1_g00001.1 (18)
| | | /-84-+ | | |
| | | | | | | | /----- Rsa1.0_22149.1_g00001.1 (38)
| | | | | | | |------66------+
| | | | | | | | \----- Rsa1.0_24109.1_g00001.1 (96)
| | | | | | | |
| | | | | | /-100+ |-------------------- Rsa1.0_11422.1_g00002.1 (47)
| | | | | | | | |
| | | | | | | | | /---------- Rsa1.0_13392.1_g00001.1 (61)
| | | | | | | | | |
| | | | | | | | \----66---+ /----- Rsa1.0_07715.1_g00002.1 (73)
| | | | | \-100-+ | \-100+
| | | | | | | \----- Rsa1.0_07715.1_g00001.1 (130)
| | | | | | |
| | | | | | \------------------------- Rsa1.0_00694.1_g00006.1 (48)
| | | | | |
| | | | | \------------------------------ Rsa1.0_00420.1_g00008.1 (98)
| | | | |
| | | | | /----- Rsa1.0_01654.1_g00004.1 (57)
| | | | | /-100+
| | | | | | \----- Rsa1.0_01943.1_g00008.1 (120)
| | | | \-----------------95----------------+
| | | | \---------- Rsa1.0_01440.1_g00008.1 (110)
| | | |
| | | | /---------- Rsa1.0_00079.1_g00026.1 (17)
| | | | |
| | | | /-100+ /----- Rsa1.0_05509.1_g00003.1 (79)
| | | | | \-85-+
| | | | /-86-+ \----- Rsa1.0_00181.1_g00021.1 (95)
| | | | | |
| | | | /-100+ \--------------- Rsa1.0_03662.1_g00003.1 (111)
| | | | | |
| | | | | \-------------------- Rsa1.0_00089.1_g00022.1 (58)
| | | | |
| | |-91-+ | /----- Rsa1.0_07424.1_g00001.1 (19)
| | | | | /-98-+
| | | | /------100------+ | \----- Rsa1.0_09034.1_g00001.1 (67)
| | | | | | /-59-+
| | | | | | | \---------- Rsa1.0_01844.1_g00002.1 (39)
| | | | | | /-59-+
| | | | | | | \--------------- Rsa1.0_03276.1_g00003.1 (45)
| | | | | | |
| | | | | \-100+-------------------- Rsa1.0_04196.1_g00001.1 (24)
| | | | | |
| | | | | \-------------------- Rsa1.0_35331.1_g00001.1 (94)
| | | | |
| | | | | /------------------------- Rsa1.0_01989.1_g00006.1 (21)
| | | | | |
| | | |---100---+ | /----- Rsa1.0_04489.1_g00005.1 (32)
| | | | | | /-84-+
| | | | | | | \----- Rsa1.0_08500.1_g00001.1 (60)
| | | | | /-100+ /-78-+
| | | | | | | | \---------- Rsa1.0_00802.1_g00014.1 (112)
| | | | | | | /-76-+
| | | | | | | | \--------------- Rsa1.0_03930.1_g00002.1 (56)
\-100+ | | | /--99-+ \-59-+
| | | | | | \-------------------- Rsa1.0_00516.1_g00016.1 (110)
| | | | | |
| | | | | \------------------------------ Rsa1.0_00073.1_g00025.1 (83)
| | | \-100+
| | | | /----- Rsa1.0_03316.1_g00003.1 (52)
| | | | /-76-+
| | | | | \----- Rsa1.0_00279.1_g00020.1 (87)
| | | \-----------100-----------+
| | | \---------- Rsa1.0_07073.1_g00002.1 (97)
| | |
| | | /----- Rsa1.0_00233.1_g00006.1 (50)
| | \---------------------100---------------------+
| | \----- Rsa1.0_01744.1_g00001.1 (53)
| |
| | /----- Rsa1.0_01360.1_g00011.1 (72)
| | /-100+
| | | \----- Rsa1.0_00038.1_g00008.1 (88)
| \---------------------100---------------------+
| | /----- Rsa1.0_00015.1_g00081.1 (89)
| \-100+
| \----- Rsa1.0_02019.1_g00002.1 (99)
|
| /---------- Rsa1.0_07505.1_g00001.1 (4)
| |
| /-99-+ /----- Rsa1.0_02433.1_g00012.1 (77)
| | \-99-+
| /-100+ \----- Rsa1.0_05241.1_g00003.1 (160)
| | |
|-------------------63-------------------+ \--------------- Rsa1.0_04195.1_g00003.1 (43)
| |
| \-------------------- Rsa1.0_00248.1_g00021.1 (27)
|
| /----- Rsa1.0_36951.1_g00001.1 (22)
| /-59-+
| | \----- Rsa1.0_19534.1_g00001.1 (26)
|------------------------100-----------------------+
| \---------- Rsa1.0_26510.1_g00001.1 (84)
|
| /----- Rsa1.0_00073.1_g00002.1 (33)
| /-92-+
| | \----- Rsa1.0_02553.1_g00002.1 (59)
|------------------------100-----------------------+
| \---------- Rsa1.0_00022.1_g00002.1 (71)
|
| /----- Rsa1.0_00826.1_g00011.1 (41)
| /-93-+
| | \----- Rsa1.0_02554.1_g00004.1 (81)
|------------------------77------------------------+
| \---------- Rsa1.0_23774.1_g00001.1 (69)
|
| /----- Rsa1.0_18284.1_g00001.1 (54)
|---------------------------89--------------------------+
| \----- Rsa1.0_00040.1_g00037.1 (55)
|
\------------------------------------------------------------- Rsa1.0_05340.1_g00003.1 (180)
|
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|