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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Solanum pimpinellifolium
M-type_MADS Family| Phylogenetic tree for domain ? help Back to Top |
|---|
Subtree rooted at node 118:
/---------- Sopim12g017300.0.1/21-48 (2)
|
/-68-+ /----- Sopim12g016170.0.1/21-48 (34)
| \-71-+
/--64-+ \----- Sopim12g016180.0.1/21-48 (42)
| |
/-84-+ \--------------- Sopim12g016150.0.1/17-48 (26)
| |
| \--------------------- Sopim12g005210.0.1/22-50 (56)
|
/-61-+ /----- Sopim10g012380.0.1/3-26 (4)
| | /-100+
| | | \----- Sopim10g012390.0.1/3-26 (59)
| \-------67------+
| | /----- Sopim10g012180.0.1/24-50 (46)
| \-96-+
| \----- Sopim10g012200.0.1/27-50 (55)
|
| /----- Sopim11g020620.0.1/11-50 (3)
/-76-+ /-50-+
| | | \----- Sopim11g020320.0.1/10-49 (23)
| | /-100+
| | | \---------- Sopim11g020660.0.1/5-33 (5)
| | |
| | /--87-+ /----- Sopim06g071300.0.1/7-54 (13)
| | | | /-100+
| | | | | \----- Sopim01g103870.0.1/16-62 (60)
| \----97---+ \-100+
| | \---------- Sopim05g013370.0.1/11-49 (24)
| |
| \--------------------- Sopim01g102260.0.1/10-51 (53)
|
| /----- Sopim04g025050.0.1/2-47 (6)
| /-88-+
| | \----- Sopim04g047870.0.1/17-63 (27)
| /-100+
| | | /----- Sopim04g025110.0.1/18-58 (30)
| | \-95-+
| /--86-+ \----- Sopim04g025030.0.1/18-57 (57)
| | |
| | \--------------- Sopim01g106730.0.1/18-63 (21)
| /-67-+
| | | /----- Sopim01g106710.0.1/16-63 (20)
| | \-------74------+
|----91---+ \----- Sopim01g106720.0.1/18-63 (45)
| |
| | /----- Sopim01g060300.0.1/14-59 (9)
| \---------98---------+
| \----- Sopim01g060310.0.1/14-59 (33)
|
| /----- Sopim06g059780.0.1/15-63 (7)
| /-100+
| | \----- Sopim06g054680.0.1/15-63 (14)
| /-89-+
| | \---------- Sopim04g056550.0.1/16-63 (61)
| /--97-+
| | \--------------- Sopim04g056740.0.1/15-63 (31)
| |
| /-91-+ /----- Sopim10g050950.0.1/15-63 (18)
/-80-+ | | /-60-+
| | | | | \----- Sopim10g050900.0.1/15-63 (43)
| | | \----100---+
| | | \---------- Sopim10g050940.0.1/19-63 (50)
| | |
| | | /----- Sopim03g007020.0.1/53-100 (19)
| | | /-58-+
| | /-100+ | \----- Sopim03g034260.0.1/16-60 (38)
| | | |-------93------+
| | | | | /----- Sopim01g097850.0.1/24-63 (41)
| | | | \-97-+
| | | | \----- Sopim04g025970.0.1/15-63 (58)
| | | |
| | | | /----- Sopim10g018070.0.1/16-65 (28)
| | | | |
| | | \---------100--------+----- Sopim10g018110.0.1/16-65 (44)
| | | |
| | | \----- Sopim10g018080.0.1/16-65 (49)
| | |
| |-56-+ /----- Sopim01g098060.0.1/15-59 (11)
| | | /-69-+
| | | | \----- Sopim01g098070.0.1/12-59 (16)
| | | /-95-+
| | | | | /----- Sopim01g098050.0.1/13-58 (12)
| | | | \-56-+
/-62-+ | | /--61-+ \----- Sopim03g062820.0.1/12-59 (29)
| | | | | |
| | | | | \--------------- Sopim01g066730.0.1/11-58 (17)
| | | | |
| | | | |--------------------- Sopim01g066500.0.1/16-60 (15)
| | | \----83---+
| | | | /---------- Sopim09g061950.0.1/15-59 (32)
| | | | |
| | | | /-100+ /----- Sopim02g032000.0.1/15-59 (36)
| | | | | \-57-+
| | | \--50-+ \----- Sopim03g119680.0.1/15-61 (52)
| | | |
| | | \--------------- Sopim01g010300.0.1/15-63 (47)
| | |
| | | /----- Sopim04g064860.0.1/30-79 (8)
/--57-+ | \--------------100-------------+
| | | \----- Sopim01g106700.0.1/19-68 (62)
| | |
| | | /----- Sopim06g048380.0.1/9-55 (10)
| | | /-96-+
| | | | \----- Sopim06g033830.0.1/9-58 (39)
| | | /-100+
| | | | \---------- Sopim07g052700.0.1/2-52 (51)
| | | /--55-+
/-67-+ | | | \--------------- Sopim03g115910.0.1/53-97 (35)
| | | \---------87--------+
| | | \--------------------- Sopim05g051830.0.1/10-58 (22)
| | |
| | | /----- Sopim12g087820.0.1/9-59 (37)
/-53-+ | \-------------------93-------------------+
| | | \----- Sopim05g015730.0.1/9-59 (63)
| | |
| | \---------------------------------------------------- Sopim06g035570.0.1/2-52 (64)
--100+ |
| \--------------------------------------------------------- Sopim10g017640.0.1/10-59 (25)
|
\-------------------------------------------------------------- Sopim00g179240.0.1/3-52 (54)
Root part of tree:
/------------------------------------------------------------------- Sopim12g088080.0.1/10-58 (1)
|
|------------------------------------------------------------------- Sopim04g076680.0.1/10-59 (48)
+
| /--------------------------------- (118)
\----------------99---------------+
\--------------------------------- Sopim01g106170.0.1/70-118 (40)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
/------------------------------------------------------------------- Sopim01g106170.0.1 (1)
|
| /------ Sopim10g012200.0.1 (2)
| /-100+
| | \------ Sopim10g012180.0.1 (25)
| /-100-+
| | | /------ Sopim10g012380.0.1 (39)
| | \-95-+
| | \------ Sopim10g012390.0.1 (63)
| |
| /---------------55---------------+ /----------- Sopim12g016150.0.1 (3)
| | | |
| | | |----------- Sopim12g005210.0.1 (33)
| | | |
| | \--94-+ /------ Sopim12g016180.0.1 (51)
| | |-90-+
| | | \------ Sopim12g016170.0.1 (55)
| | |
| | \----------- Sopim12g017300.0.1 (52)
| |
| | /----------- Sopim11g020320.0.1 (4)
| | |
| | /-100-+ /------ Sopim11g020620.0.1 (7)
| | | \-92-+
| | | \------ Sopim11g020660.0.1 (15)
| | |
| | /-97-+ /------ Sopim06g071300.0.1 (19)
| | | | /-100+
| | | | | \------ Sopim01g103870.0.1 (38)
| |-------------99------------+ \--99-+
| | | \----------- Sopim05g013370.0.1 (26)
| | |
| | \---------------------- Sopim01g102260.0.1 (46)
| |
| | /----------------- Sopim01g097850.0.1 (8)
| | |
| | | /------ Sopim06g059780.0.1 (23)
| | /-61-+ /-100+
| | | | | \------ Sopim06g054680.0.1 (59)
| | | \-100-+
| | | | /------ Sopim04g056740.0.1 (27)
| | | \-100+
| | /-100-+ \------ Sopim04g056550.0.1 (32)
| | | |
| | | | /------ Sopim10g050940.0.1 (36)
| | | | /-80-+
| | | | | \------ Sopim10g050950.0.1 (42)
| | | \----100---+
| | | \----------- Sopim10g050900.0.1 (37)
| | /-68-+
| | | | /----------------- Sopim04g025970.0.1 (11)
| | | | |
| | | | | /------ Sopim10g018070.0.1 (45)
| | | | /-99-+ /-94-+
| | | | | | | \------ Sopim10g018110.0.1 (50)
| | /----100----+ | | \-100-+
| | | | \--55-+ \----------- Sopim10g018080.0.1 (61)
| | | | |
| | | | \---------------------- Sopim03g007020.0.1 (56)
| | | |
| /--94-+ | \--------------------------------- Sopim03g034260.0.1 (10)
| | | |
| | | | /------ Sopim04g064860.0.1 (9)
+ | | | /------------100-----------+
| | | | | \------ Sopim01g106700.0.1 (34)
| | | | |
| | | | | /------ Sopim04g025110.0.1 (12)
| | | | | /-100+
| | | | | | \------ Sopim04g025030.0.1 (16)
| | |-59-+ | /--89-+
| | | | | | | /------ Sopim04g025050.0.1 (24)
| | | | /--80-+ | \-61-+
| | | | | | /-100+ \------ Sopim04g047870.0.1 (47)
| | | | | | | |
| | | | | | | \----------------- Sopim01g106730.0.1 (29)
| | | | | | /--84-+
| | | | | | | | /------ Sopim01g106710.0.1 (21)
| | | | | | | \-------88------+
| | | | | \-72-+ \------ Sopim01g106720.0.1 (41)
| | | | | |
| | | | | | /------ Sopim01g060300.0.1 (44)
| | | | | \---------100---------+
| | | | | \------ Sopim01g060310.0.1 (58)
| | | \--64-+
| | | | /----------- Sopim03g062820.0.1 (13)
| | | | |
| | | | | /------ Sopim01g098060.0.1 (53)
| /-97-+ | | /-100-+-100+
| | | | | | | \------ Sopim01g098070.0.1 (62)
| | | | | | |
| | | | | /-92-+ \----------- Sopim01g098050.0.1 (60)
| | | | | | |
| | | | | | | /------ Sopim01g066730.0.1 (28)
| | | | | | \----72----+
| | | | \-------90-------+ \------ Sopim01g066500.0.1 (35)
| | | | |
| | | | | /----------------- Sopim01g010300.0.1 (14)
| | | | | |
| | | | \-76-+ /----------- Sopim02g032000.0.1 (20)
| | | | | |
| | | | \-100-+ /------ Sopim09g061950.0.1 (48)
| | | | \-68-+
| | | | \------ Sopim03g119680.0.1 (64)
| | | |
| | | | /------ Sopim07g052700.0.1 (18)
|-100-+ | | /-53-+
| | | | | \------ Sopim06g048380.0.1 (30)
| | | | /-100-+
| | | | | \----------- Sopim06g033830.0.1 (54)
| | | \---------------96---------------+
| | | \----------------- Sopim03g115910.0.1 (43)
| | |
| | | /------ Sopim05g015730.0.1 (6)
| | \------------------------98-----------------------+
| | \------ Sopim12g087820.0.1 (40)
| |
| | /------ Sopim05g051830.0.1 (5)
| |--------------------------54--------------------------+
| | \------ Sopim06g035570.0.1 (57)
| |
| |------------------------------------------------------------- Sopim00g179240.0.1 (22)
| |
| \------------------------------------------------------------- Sopim10g017640.0.1 (31)
|
| /------ Sopim04g076680.0.1 (17)
\-----------------------------97-----------------------------+
\------ Sopim12g088080.0.1 (49)
|
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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