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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Brassica rapa
MIKC_MADS Family| Phylogenetic tree for domain ? help Back to Top |
|---|
/------------------------------------------------------------------- XP_009110147.1/9-58 (1)
|
|------------------------------------------------------------------- XP_009103260.1/9-58 (75)
|
| /------- XP_009130488.1/9-56 (2)
| |
| /--83-+------- XP_009150582.1/9-56 (26)
| | |
| /--66--+ \------- XP_009130489.1/9-56 (41)
| | |
| /--84--+ \------------- XP_009150584.1/9-56 (30)
| | |
| | \-------------------- XP_009130486.1/9-56 (52)
| |
| |--------------------------- XP_009132707.1/9-59 (13)
| /------------100-----------+
| | |--------------------------- XP_009125323.1/9-58 (17)
| | |
| | |--------------------------- XP_009122081.1/9-59 (39)
| | |
| | \--------------------------- XP_009131145.1/9-58 (49)
| |
| | /------- XP_009104172.1/24-73 (3)
| | /--67-+
| | | \------- XP_009138935.1/24-73 (20)
| | |
| | /--81--+------------- XP_009116562.1/24-74 (9)
| | | |
| | | \------------- XP_009142866.1/24-73 (69)
| | /--83--+
| | | | /------- XP_009113581.1/10-59 (36)
| | | \-----95-----+
| |------------94------------+ \------- XP_009134170.1/9-57 (80)
| | |
| | | /------- XP_009132356.1/25-75 (37)
| | \---------82--------+
| | \------- XP_009136975.1/63-113 (50)
| |
| | /------- XP_009120826.1/9-58 (4)
| | |
| |----------------------100---------------------+------- XP_009126431.1/9-58 (22)
| | |
| | \------- XP_009131786.1/9-58 (66)
| |
| | /------- XP_009107059.1/9-59 (5)
| | /---------64--------+
| | | \------- XP_009132582.1/9-59 (55)
| | |
| | | /------- XP_009136477.1/9-59 (53)
| | /--99-+ /--95-+
| | | | | \------- XP_009130170.1/19-69 (70)
| | | | /--55--+
| | | | | \------------- XP_009109211.1/9-59 (57)
| | /--72--+ \--87--+
| | | | \-------------------- XP_009139222.1/9-59 (61)
| | | |
| | /--99--+ \--------------------------------- XP_009107033.1/47-97 (77)
| | | |
| | | \---------------------------------------- XP_009132580.1/11-61 (6)
| |--91--+
| | | /------- XP_009130198.1/9-59 (10)
| | \-------------------99------------------+
| | \------- XP_009112008.1/9-59 (45)
| |
| | /------- XP_009105460.1/9-59 (7)
| | |
| | |------- XP_009127703.1/9-59 (54)
| | /--93-+
+ | | |------- XP_009105010.1/9-59 (78)
| | | |
| | | \------- XP_009109914.1/9-59 (85)
| | /--61--+
| | | |------------- XP_009136412.1/9-59 (46)
| | | |
| | | \------------- XP_009111964.1/9-59 (82)
| | |
| | | /------- XP_009111804.1/10-58 (33)
| |----------------64---------------+ |
| | |-----97-----+------- XP_009151758.1/13-61 (38)
| | | |
| | | \------- XP_009129675.1/10-58 (64)
| | |
| | \-------------------- XP_009130138.1/9-59 (88)
| |
| | /------- XP_009105505.1/13-53 (8)
| | |
| | |------- XP_009139036.1/16-66 (60)
| | |
| |----------------------79----------------------+------- XP_009116442.1/20-70 (67)
| | |
| | |------- XP_009147629.1/9-59 (73)
| | |
| | \------- XP_009104054.1/9-59 (87)
| |
| /-100-+ /------- XP_009133734.1/18-68 (11)
| | | |
| | | /-----97-----+------- XP_009142352.1/9-59 (14)
| | | | |
| | | | \------- XP_009143158.1/9-59 (86)
| | | |
| | | |-------------------- XP_009114655.1/9-59 (21)
| | |----------------70---------------+
| | | | /------- XP_009108594.1/9-59 (35)
| | | | /--68-+
| | | | | \------- XP_009136496.1/9-59 (84)
| | | \--68--+
| | | \------------- XP_009137303.1/9-59 (89)
| | |
| | |------------------------------------------------------ XP_009138791.1/9-59 (12)
| | |
| | | /------- XP_009117898.1/9-59 (15)
| | | /--99-+
| | | | \------- XP_009147359.1/9-59 (42)
| | | |
| | | |------------- XP_009121545.1/9-59 (24)
| | | |
| | | | /------- XP_009152152.1/9-59 (29)
| | | |--93-+
| | | /--57--+ \------- XP_009129078.1/9-59 (83)
| | | | |
| | | | |------------- XP_009131500.1/9-59 (34)
| | | | |
| | |----------------98---------------+ |------------- XP_009102994.1/9-59 (44)
| | | | |
| | | | \------------- XP_009109825.1/9-59 (76)
| | | |
| | | \-------------------- XP_009113782.1/9-59 (81)
| | |
| | | /------- XP_009139246.1/9-59 (16)
| | |----------------------100---------------------+
| | | \------- XP_009116122.1/9-59 (62)
| | |
| | | /------- XP_009127862.1/9-57 (18)
| | | /--78-+
| | | | \------- XP_009105825.1/9-57 (72)
\--52--+ |-------------------100------------------+
| | \------------- XP_009104908.1/9-57 (43)
| |
| | /------- XP_009133732.1/9-58 (19)
| |----------------------85----------------------+
| | \------- XP_009143157.1/9-58 (59)
| |
| | /-------------------- XP_009123192.1/10-59 (23)
| | |
| | | /------- XP_009138271.1/9-59 (27)
| | |-----91-----+
| | | \------- XP_009115272.1/9-59 (31)
| |----------------69---------------+
| | | /------- XP_009117344.1/10-59 (28)
| | | /--85-+
| | | | \------- XP_009140371.1/9-59 (58)
| | | |
| | \--76--+------------- XP_009131941.1/10-59 (56)
| | |
| | \------------- XP_009109406.1/10-59 (68)
| |
| |------------------------------------------------------ XP_009115015.1/1-31 (25)
| |
| | /------- XP_009141444.1/9-59 (32)
| | /--71-+
| | | \------- XP_009136371.1/25-75 (40)
| |-------------------100------------------+
| | \------------- XP_009130118.1/25-74 (63)
| |
| | /------- XP_009137453.1/9-59 (48)
| | /--93-+
| | | \------- XP_009138166.1/9-59 (65)
| |-------------------100------------------+
| | | /------- XP_009112514.1/10-59 (51)
| | \--57-+
| | \------- XP_009140365.1/10-59 (71)
| |
| | /------- XP_009131359.1/9-59 (74)
| \----------------------100---------------------+
| \------- XP_009121726.1/9-59 (79)
|
\------------------------------------------------------------ XP_009106441.1/9-58 (47)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 168:
/---------- XP_009142352.1 (2)
|
/----100---+ /----- XP_009133734.1 (11)
| \-99-+
| \----- XP_009143158.1 (73)
|
/----93---+ /---------- XP_009137303.1 (25)
| | |
| | /-100+ /----- XP_009108594.1 (45)
| | | \-99-+
| \-100-+ \----- XP_009136496.1 (56)
| |
| \--------------- XP_009114655.1 (79)
|
| /----- XP_009107033.1 (6)
| /------100------+
/---100---+ | \----- XP_009132580.1 (26)
| | |
| | | /----- XP_009139222.1 (36)
| | | /-100+
| | /-100+ | \----- XP_009109211.1 (78)
| | | | /-100+
| | | | | | /----- XP_009136477.1 (37)
| | | | | \-100+
| | | \--99-+ \----- XP_009130170.1 (61)
| | | |
| \-100+ | /----- XP_009107059.1 (52)
| | \---100---+
| | \----- XP_009132582.1 (88)
| |
| | /----- XP_009112008.1 (48)
| \---------100--------+
| \----- XP_009130198.1 (66)
|
| /----- XP_009126431.1 (3)
| |
| /---100---+----- XP_009131786.1 (43)
| | |
| | \----- XP_009120826.1 (58)
| |
| /--89-+ /----- XP_009141444.1 (33)
| | | /-61-+
| | | | \----- XP_009130118.1 (39)
| | \-100+
| /------100-----+ \---------- XP_009136371.1 (60)
| | |
| | | /----- XP_009116122.1 (16)
| | \------100------+
| | \----- XP_009139246.1 (84)
| |
| | /----- XP_009112514.1 (4)
| | /-100+
| | | \----- XP_009140365.1 (53)
| | /------100------+
| | | | /----- XP_009138166.1 (81)
| | | \-100+
| | | \----- XP_009137453.1 (89)
|-83-+ |
| | | /----- XP_009140371.1 (13)
| | | /-100+
| | /-76-+ | \----- XP_009117344.1 (30)
| | | | /-100+
| | | | | | /----- XP_009131941.1 (71)
| | | | | \-100+
| | | | /--75-+ \----- XP_009109406.1 (85)
| | | | | |
| | | | | | /----- XP_009115272.1 (74)
| | | \-100+ \---100---+
| | | | \----- XP_009138271.1 (77)
| | | |
| \-90-+ \--------------------- XP_009123192.1 (27)
| |
| | /----- XP_009104054.1 (10)
| | /-100+
| | | \----- XP_009116442.1 (49)
| | /-97-+
| | | \---------- XP_009139036.1 (68)
| | /-100-+
| | | \--------------- XP_009147629.1 (87)
| \---100---+
| | /----- XP_009121726.1 (23)
| \------100------+
| \----- XP_009131359.1 (47)
|
/-96-+ /--------------- XP_009150584.1 (5)
| | |
| | /--87-+ /---------- XP_009130488.1 (21)
| | | | |
| | | \-100+ /----- XP_009130489.1 (22)
| | /-100+ \-79-+
| | | | \----- XP_009150582.1 (83)
| | | |
| | | \--------------------- XP_009130486.1 (19)
| | |
| | /-100+ /----- XP_009132707.1 (17)
| | | | /-59-+
| | | | | \----- XP_009125323.1 (55)
| | | | /-84-+
| |----97---+ | | \---------- XP_009131145.1 (54)
| | | \----100---+
| | | \--------------- XP_009122081.1 (70)
| | |
| | \------------------------------- XP_009115015.1 (41)
| |
| | /----- XP_009121545.1 (7)
| | /-99-+
| | | \----- XP_009131500.1 (40)
| | /-100+
| | | | /----- XP_009147359.1 (20)
| | | \-100+
| | /--82-+ \----- XP_009117898.1 (29)
| | | |
| | | | /----- XP_009152152.1 (44)
| | | \---100---+
| | /---100---+ \----- XP_009129078.1 (59)
| | | |
| | | | /----- XP_009102994.1 (18)
| | | | |
| | | \------100------+----- XP_009113782.1 (38)
| | | |
| | | \----- XP_009109825.1 (64)
| | |
/-100-+ | /-100+ /----- XP_009111804.1 (8)
| | | | | /-73-+
| | | | | | \----- XP_009129675.1 (15)
| | | | | /------100------+
| | | | | | \---------- XP_009151758.1 (28)
| | | | | |
| | | | | | /---------- XP_009111964.1 (12)
| | | | | | |
| | | | \-100+ /----100---+ /----- XP_009136412.1 (14)
| | | | | | \-86-+
| | | | | | \----- XP_009130138.1 (24)
| | |-99-+ | |
| | | | | | /----- XP_009105460.1 (34)
| | | | \-100+ /-89-+
| | | | | | \----- XP_009105010.1 (65)
| | | | | /-100+
| | | | | | \---------- XP_009127703.1 (82)
| | | | \-100-+
| | | | \--------------- XP_009109914.1 (72)
| | | |
| | | | /---------- XP_009138791.1 (32)
/-80-+ | | | |
| | | | \-----------100-----------+ /----- XP_009143157.1 (57)
| | | | \-100+
| | | | \----- XP_009133732.1 (67)
| | | |
| | | | /---------- XP_009106441.1 (42)
| | | | |
| | | | /-100+ /----- XP_009103260.1 (69)
| | | | | \-100+
| | | \------------92-----------+ \----- XP_009110147.1 (86)
| | | |
| | | \--------------- XP_009105505.1 (51)
/-100+ | |
| | | | /----- XP_009127862.1 (63)
| | | | /-78-+
| | | | | \----- XP_009105825.1 (80)
| | | \----------------100----------------+
| | | \---------- XP_009104908.1 (75)
| | |
| | | /----- XP_009113581.1 (9)
--100+ | \----------------------100---------------------+
| | \----- XP_009134170.1 (50)
| |
| | /----- XP_009132356.1 (31)
| \------------------------100------------------------+
| \----- XP_009136975.1 (62)
|
\-------------------------------------------------------------- XP_009142866.1 (76)
Root part of tree:
/------------------------------------------------------------------- XP_009104172.1 (1)
|
|------------------------------------------------------------------- XP_009138935.1 (35)
+
| /--------------------------------- (168)
\---------------100---------------+
\--------------------------------- XP_009116562.1 (46)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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