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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Castanea mollissima
MYB_related Family| Phylogenetic tree for domain ? help Back to Top |
|---|
Subtree rooted at node 100:
/----- maker-scaffold07746-snap-gene-0.12-mRNA-1/66-110 (2)
/-66-+
| \----- maker-scaffold02896-snap-gene-0.29-mRNA-1/22-66 (6)
/-100+
| \---------- augustus_masked-scaffold05845-abinit-gene-0.1-mRNA-1/36-80 (16)
/--------------------88-------------------+
| | /----- maker-scaffold02514-snap-gene-0.25-mRNA-1/60-104 (22)
| \----81---+
| \----- maker-scaffold00005-snap-gene-2.50-mRNA-1/36-80 (75)
|
| /----- maker-scaffold03144-snap-gene-0.35-mRNA-1/2-32 (11)
| /-97-+
| | \----- maker-scaffold08290-augustus-gene-0.12-mRNA-1/76-121 (30)
| /-78-+
| | \---------- maker-scaffold04891-snap-gene-0.29-mRNA-1/17-63 (74)
| /--76-+
| | \--------------- maker-scaffold04891-snap-gene-0.27-mRNA-1/114-159 (46)
| /-83-+
| | \--------------------- maker-scaffold04269-snap-gene-0.27-mRNA-1/96-133 (27)
/-59-+ /-59-+
| | | \-------------------------- augustus_masked-scaffold01226-abinit-gene-0.11-mRNA-1/100-145 (54)
| | /-75-+
| | | \------------------------------- augustus_masked-scaffold05815-abinit-gene-0.3-mRNA-1/103-147 (13)
| | /-66-+
| | | | /----- maker-scaffold00361-augustus-gene-0.20-mRNA-1/98-142 (45)
| | | \--------------100-------------+
| | /-59-+ \----- maker-scaffold00054-augustus-gene-1.42-mRNA-1/94-138 (48)
| | | |
| | | \----------------------------------------- maker-scaffold08893-augustus-gene-0.7-mRNA-1/2-46 (59)
| | /--83-+
| | | |---------------------------------------------- maker-scaffold18971-augustus-gene-0.3-mRNA-1/2-46 (49)
| | | |
| \-100+ \---------------------------------------------- maker-scaffold02485-augustus-gene-0.26-mRNA-1/98-142 (50)
| |
| \---------------------------------------------------- maker-scaffold04233-snap-gene-0.20-mRNA-1/120-164 (18)
|
| /--------------- augustus_masked-scaffold00344-abinit-gene-0.7-mRNA-1/14-58 (5)
| |
| | /----- snap_masked-scaffold05527-abinit-gene-0.10-mRNA-1/7-52 (9)
|----------------------100---------------------+ /-59-+
| | | \----- maker-scaffold06019-augustus-gene-0.9-mRNA-1/10-55 (56)
| | |
| \-89-+---------- augustus_masked-scaffold00629-abinit-gene-0.22-mRNA-1/13-57 (66)
--71-+ |
| \---------- augustus_masked-scaffold03365-abinit-gene-0.1-mRNA-1/15-58 (72)
|
| /----- augustus_masked-scaffold03753-abinit-gene-0.8-mRNA-1/195-242 (8)
| /-100+
| | \----- snap_masked-scaffold02688-abinit-gene-0.9-mRNA-1/205-252 (51)
| |
|-------------------------61------------------------+---------- maker-scaffold06443-snap-gene-0.14-mRNA-1/130-171 (52)
| |
| \---------- maker-scaffold05960-augustus-gene-0.8-mRNA-1/901-944 (62)
|
|-------------------------------------------------------------- maker-scaffold02338-snap-gene-0.27-mRNA-1/15-72 (21)
|
| /----- maker-scaffold03669-augustus-gene-0.21-mRNA-1/10-62 (28)
| /-72-+
| | \----- maker-scaffold02707-augustus-gene-0.23-mRNA-1/29-58 (36)
|------------------------100------------------------+
| \---------- maker-scaffold02530-augustus-gene-0.31-mRNA-1/10-44 (64)
|
| /----- maker-scaffold00002-snap-gene-0.47-mRNA-1/72-113 (29)
|---------------------------95---------------------------+
| \----- maker-scaffold11291-snap-gene-0.13-mRNA-1/119-160 (40)
|
| /----- maker-scaffold07113-snap-gene-0.15-mRNA-1/54-88 (61)
\---------------------------99---------------------------+
\----- maker-scaffold01803-snap-gene-0.30-mRNA-1/31-68 (69)
Root part of tree:
/------------------------------------------------------------------- snap_masked-scaffold15949-abinit-gene-0.5-mRNA-1/9-56 (1)
|
|------------------------------------------------------------------- augustus_masked-scaffold04687-abinit-gene-0.1-mRNA-1/9-56 (68)
|
| /------------------------------------ (100)
| |
| | /----- maker-scaffold00040-snap-gene-2.15-mRNA-1/26-76 (3)
| | /-100+
| | | \----- snap_masked-scaffold16687-abinit-gene-0.3-mRNA-1/5-55 (73)
| | /-97-+
| | | \---------- maker-scaffold07098-snap-gene-0.18-mRNA-1/5-55 (10)
| | /--50-+
| | | \--------------- maker-scaffold01400-augustus-gene-0.25-mRNA-1/471-518 (4)
| /-82-+ /-55-+
| | | | \--------------------- maker-scaffold00079-snap-gene-0.31-mRNA-1/764-818 (60)
| | | |
| | | /-70-+ /----- snap_masked-scaffold10806-abinit-gene-0.2-mRNA-1/283-330 (43)
| | | | | /-99-+
| | | | | | \----- maker-scaffold01579-snap-gene-0.33-mRNA-1/452-500 (47)
| | | | \------100------+
| | | | | /----- maker-scaffold09202-snap-gene-0.11-mRNA-1/579-628 (44)
| | \-52-+ \-100+
| | | \----- maker-scaffold00656-augustus-gene-0.49-mRNA-1/598-647 (65)
| | |
| | | /----- maker-scaffold10447-augustus-gene-0.11-mRNA-1/111-155 (15)
| | \-----------100-----------+
| | \----- maker-scaffold01903-augustus-gene-0.21-mRNA-1/287-315 (42)
| |
| | /----- maker-scaffold08422-augustus-gene-0.9-mRNA-1/25-67 (7)
| | |
| | /-60-+----- maker-scaffold03087-augustus-gene-0.16-mRNA-1/26-68 (26)
| | | |
| | | \----- maker-scaffold01024-augustus-gene-0.33-mRNA-1/25-80 (58)
| | /-100+
| | | | /----- maker-scaffold07448-augustus-gene-0.7-mRNA-1/29-68 (24)
| | | \-100+
| /-99-+ /--61-+ \----- maker-scaffold01416-snap-gene-0.39-mRNA-1/30-69 (57)
| | | | |
+ | | | \--------------- snap_masked-scaffold00077-abinit-gene-0.18-mRNA-1/10-55 (55)
| | | |
| | | | /----- augustus_masked-scaffold32910-abinit-gene-0.0-mRNA-1/23-59 (19)
| | | |------100------+
| | | | \----- maker-scaffold01396-snap-gene-0.27-mRNA-1/29-69 (32)
| | | |
| | | | /----- maker-scaffold17568-snap-gene-0.6-mRNA-1/46-91 (25)
| | | /-99-+-------88------+
| | | | | \----- maker-scaffold24892-snap-gene-0.2-mRNA-1/28-73 (70)
| | | | |
| | | | | /----- maker-scaffold01005-snap-gene-0.44-mRNA-1/35-77 (39)
| /--93-+ | | |-------68------+
| | | | | | \----- augustus_masked-scaffold24451-abinit-gene-0.1-mRNA-1/4-26 (41)
| | | | /-86-+ |
| | | | | | | /----- augustus_masked-scaffold00919-abinit-gene-0.14-mRNA-1/16-59 (53)
| | | | | | \-------86------+
| | | | | | \----- augustus_masked-scaffold02532-abinit-gene-0.4-mRNA-1/12-36 (71)
| | | | /-80-+ |
| | | | | | \-------------------------- maker-scaffold01265-snap-gene-0.37-mRNA-1/14-72 (33)
| | | | | |
| | | \-86-+ \------------------------------- maker-scaffold01198-snap-gene-0.34-mRNA-1/10-74 (67)
| | | |
| | | \------------------------------------ augustus_masked-scaffold01221-abinit-gene-0.6-mRNA-1/14-63 (63)
| /-91-+ |
| | | \---------------------------------------------- maker-scaffold01886-augustus-gene-0.22-mRNA-1/14-56 (37)
| | |
| | | /----- snap_masked-scaffold17955-abinit-gene-0.3-mRNA-1/14-45 (12)
| | | /-90-+
| | | | \----- maker-scaffold04520-snap-gene-0.20-mRNA-1/14-42 (38)
| | | /-98-+
| | | | \---------- maker-scaffold02956-snap-gene-0.16-mRNA-1/14-45 (23)
| | | /--99-+
| /-56-+ | | \--------------- maker-scaffold18391-snap-gene-0.8-mRNA-1/14-61 (34)
| | | | |
| | | \--------------92--------------+ /----- maker-scaffold31623-augustus-gene-0.2-mRNA-1/14-61 (14)
| | | | /-100+
| | | | | \----- maker-scaffold01886-augustus-gene-0.21-mRNA-1/14-61 (31)
\-100+ | \----95----+
| | \---------- snap_masked-scaffold30561-abinit-gene-0.2-mRNA-1/14-43 (20)
| |
| \--------------------------------------------------------- augustus_masked-scaffold27471-abinit-gene-0.0-mRNA-1/14-61 (35)
|
\-------------------------------------------------------------- maker-scaffold07480-snap-gene-0.12-mRNA-1/14-61 (17)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
/------------------------------------------------------------------- maker-scaffold08422-augustus-gene-0.9-mRNA-1 (1)
|
|------------------------------------------------------------------- maker-scaffold01024-augustus-gene-0.33-mRNA-1 (68)
|
|------------------------------------------------------------------- maker-scaffold03087-augustus-gene-0.16-mRNA-1 (75)
|
| /------- maker-scaffold01005-snap-gene-0.44-mRNA-1 (2)
| /--54-+
| | \------- maker-scaffold17568-snap-gene-0.6-mRNA-1 (3)
| /--66--+
| | \------------- maker-scaffold24892-snap-gene-0.2-mRNA-1 (22)
| /------------57------------+
| | \-------------------- maker-scaffold07480-snap-gene-0.12-mRNA-1 (26)
| |
| |----------------------------------------------- augustus_masked-scaffold27471-abinit-gene-0.0-mRNA-1 (4)
| |
| | /------- maker-scaffold02338-snap-gene-0.27-mRNA-1 (5)
| |-------------------52------------------+
| | \------- augustus_masked-scaffold24451-abinit-gene-0.1-mRNA-1 (70)
| |
| | /------- maker-scaffold02485-augustus-gene-0.26-mRNA-1 (6)
| | /-100-+
| | | \------- maker-scaffold18971-augustus-gene-0.3-mRNA-1 (72)
| | /------------59------------+
| | | \------------- maker-scaffold08893-augustus-gene-0.7-mRNA-1 (61)
| | |
| | | /------- maker-scaffold04891-snap-gene-0.27-mRNA-1 (25)
| | | /--70-+
| | | | \------- maker-scaffold04891-snap-gene-0.29-mRNA-1 (71)
| | | /--95--+
| | | | | /------- maker-scaffold08290-augustus-gene-0.12-mRNA-1 (40)
| |--88--+ | \-100-+
| | | /--94--+ \------- maker-scaffold03144-snap-gene-0.35-mRNA-1 (67)
| | | | |
| | | | \-------------------- maker-scaffold04269-snap-gene-0.27-mRNA-1 (63)
| | | /--94-+
| | | | | /------- augustus_masked-scaffold01226-abinit-gene-0.11-mRNA-1 (29)
| | | | \--------100--------+
| | \--94--+ \------- augustus_masked-scaffold05815-abinit-gene-0.3-mRNA-1 (30)
| | |
| | | /------- maker-scaffold00361-augustus-gene-0.20-mRNA-1 (27)
| | \-----------100-----------+
| | \------- maker-scaffold00054-augustus-gene-1.42-mRNA-1 (73)
| |
| | /------- snap_masked-scaffold17955-abinit-gene-0.3-mRNA-1 (7)
| | /--94-+
| | | \------- maker-scaffold02956-snap-gene-0.16-mRNA-1 (24)
| |----------------90---------------+
| | \------------- maker-scaffold04520-snap-gene-0.20-mRNA-1 (13)
| |
| | /------- maker-scaffold01903-augustus-gene-0.21-mRNA-1 (8)
| |------------------100------------------+
| | \------- maker-scaffold10447-augustus-gene-0.11-mRNA-1 (54)
| |
| |----------------------------------------------- maker-scaffold01265-snap-gene-0.37-mRNA-1 (9)
| |
| | /------- maker-scaffold07113-snap-gene-0.15-mRNA-1 (10)
| |------------------100------------------+
| | \------- maker-scaffold01803-snap-gene-0.30-mRNA-1 (66)
| |
| |----------------------------------------------- maker-scaffold06443-snap-gene-0.14-mRNA-1 (11)
| |
| |----------------------------------------------- augustus_masked-scaffold02532-abinit-gene-0.4-mRNA-1 (12)
| |
| | /------- maker-scaffold00656-augustus-gene-0.49-mRNA-1 (14)
+ | /-100-+
| | | \------- maker-scaffold09202-snap-gene-0.11-mRNA-1 (64)
| |----------------66---------------+
| | | /------- augustus_masked-scaffold03753-abinit-gene-0.8-mRNA-1 (62)
| | \-100-+
| | \------- snap_masked-scaffold02688-abinit-gene-0.9-mRNA-1 (65)
| |
| | /------- snap_masked-scaffold16687-abinit-gene-0.3-mRNA-1 (15)
| | /-100-+
| | | \------- maker-scaffold00040-snap-gene-2.15-mRNA-1 (74)
| | /--100-+
| /--93--+ | \------------- maker-scaffold07098-snap-gene-0.18-mRNA-1 (55)
| | | |
| | |------------74------------+ /------------- maker-scaffold02530-augustus-gene-0.31-mRNA-1 (42)
| | | | |
| | | \--99--+ /------- maker-scaffold02707-augustus-gene-0.23-mRNA-1 (48)
| | | \--59-+
| | | \------- maker-scaffold03669-augustus-gene-0.21-mRNA-1 (49)
| | |
| | | /------- augustus_masked-scaffold05845-abinit-gene-0.1-mRNA-1 (16)
| | | /--94-+
| | | | \------- maker-scaffold07746-snap-gene-0.12-mRNA-1 (51)
| | | /--100-+
| | | | \------------- maker-scaffold02896-snap-gene-0.29-mRNA-1 (28)
| | |------------89------------+
| | | | /------- maker-scaffold02514-snap-gene-0.25-mRNA-1 (34)
| | | \-----99-----+
| | | \------- maker-scaffold00005-snap-gene-2.50-mRNA-1 (45)
| | |
| | | /------- snap_masked-scaffold15949-abinit-gene-0.5-mRNA-1 (17)
| | | /--78-+
| | | | \------- augustus_masked-scaffold04687-abinit-gene-0.1-mRNA-1 (31)
| | |----------------77---------------+
| | | | /------- maker-scaffold11291-snap-gene-0.13-mRNA-1 (32)
| | | \--75-+
| | | \------- maker-scaffold00002-snap-gene-0.47-mRNA-1 (44)
| | |
| | | /------------- maker-scaffold04233-snap-gene-0.20-mRNA-1 (18)
| | | |
| | | | /------- augustus_masked-scaffold03365-abinit-gene-0.1-mRNA-1 (19)
| | |----------------87---------------+ |
| | | | |------- maker-scaffold06019-augustus-gene-0.9-mRNA-1 (35)
| | | | |
| | | \--63-+------- augustus_masked-scaffold00629-abinit-gene-0.22-mRNA-1 (39)
| | | |
| /--94-+ | |------- snap_masked-scaffold05527-abinit-gene-0.10-mRNA-1 (52)
| | | | |
| | | | \------- augustus_masked-scaffold00344-abinit-gene-0.7-mRNA-1 (69)
| | | |
| | | | /------- maker-scaffold01886-augustus-gene-0.21-mRNA-1 (20)
| | | | /--99-+
| | | | | \------- maker-scaffold31623-augustus-gene-0.2-mRNA-1 (41)
| | | |----------------85---------------+
| | | | \------------- maker-scaffold01886-augustus-gene-0.22-mRNA-1 (38)
| | | |
| | | | /------- maker-scaffold01579-snap-gene-0.33-mRNA-1 (21)
| | | |------------------100------------------+
| | | | \------- snap_masked-scaffold10806-abinit-gene-0.2-mRNA-1 (36)
| | | |
| | | | /------- maker-scaffold01396-snap-gene-0.27-mRNA-1 (33)
| | | |------------------100------------------+
| | | | \------- augustus_masked-scaffold32910-abinit-gene-0.0-mRNA-1 (50)
| | | |
| | | |----------------------------------------------- maker-scaffold05960-augustus-gene-0.8-mRNA-1 (43)
\--63--+ | |
| | |----------------------------------------------- maker-scaffold00079-snap-gene-0.31-mRNA-1 (46)
| | |
| | |----------------------------------------------- maker-scaffold18391-snap-gene-0.8-mRNA-1 (53)
| | |
| | |----------------------------------------------- snap_masked-scaffold30561-abinit-gene-0.2-mRNA-1 (56)
| | |
| | |----------------------------------------------- maker-scaffold01198-snap-gene-0.34-mRNA-1 (58)
| | |
| | |----------------------------------------------- maker-scaffold01400-augustus-gene-0.25-mRNA-1 (59)
| | |
| | \----------------------------------------------- augustus_masked-scaffold01221-abinit-gene-0.6-mRNA-1 (60)
| |
| | /------- snap_masked-scaffold00077-abinit-gene-0.18-mRNA-1 (23)
| \----------------------57----------------------+
| \------- augustus_masked-scaffold00919-abinit-gene-0.14-mRNA-1 (57)
|
| /------- maker-scaffold07448-augustus-gene-0.7-mRNA-1 (37)
\-------------------------96-------------------------+
\------- maker-scaffold01416-snap-gene-0.39-mRNA-1 (47)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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