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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Fragaria vesca
MYB_related Family| Phylogenetic tree for domain ? help Back to Top |
|---|
Subtree rooted at node 115:
/----- mrna25374.1-v1.0-hybrid/306-343 (2)
/-51-+
| \----- mrna21830.1-v1.0-hybrid/575-616 (52)
/-100+
| \---------- mrna21829.1-v1.0-hybrid/561-602 (43)
/--------------74--------------+
| \--------------- mrna20578.1-v1.0-hybrid/130-171 (26)
|
| /--------------------- mrna23113.1-v1.0-hybrid/57-101 (4)
| |
| | /----- mrna19217.1-v1.0-hybrid/14-53 (6)
| | /-99-+
| /-60-+ | \----- mrna35171.1-v1.0-hybrid/30-69 (18)
| | | /-100+
| | | | \---------- mrna23919.1-v1.0-hybrid/25-68 (9)
| /-50-+ \--99-+
| | | \--------------- mrna32606.1-v1.0-hybrid/41-80 (44)
| | |
| /-99-+ \-------------------------- mrna16736.1-v1.0-hybrid/123-146 (17)
| | |
| | | /----- mrna07484.1-v1.0-hybrid/41-63 (48)
| /-95-+ \------------75-----------+
| | | \----- mrna20254.1-v1.0-hybrid/133-155 (58)
| | |
|-76-+ \------------------------------------ mrna13970.1-v1.0-hybrid/61-106 (8)
| |
| | /----- mrna24516.1-v1.0-hybrid/106-128 (20)
| \-----------------61----------------+
| \----- mrna10181.1-v1.0-hybrid/14-66 (34)
|
| /---------- mrna05766.1-v1.0-hybrid/48-77 (7)
| |
| | /----- mrna25445.1-v1.0-hybrid/5-56 (19)
| |-100+
| /-93-+ \----- mrna05764.1-v1.0-hybrid/5-55 (63)
| | |
| | |---------- mrna12682.1-v1.0-hybrid/109-159 (33)
| | |
| /--87-+ \---------- mrna05767.1-v1.0-hybrid/67-116 (49)
| | |
| | | /----- mrna32264.1-v1.0-hybrid/621-669 (53)
| | \---100---+
/--68-+ | \----- mrna28104.1-v1.0-hybrid/537-585 (54)
| |-----------100----------+
| | | /----- mrna02230.1-v1.0-hybrid/521-570 (11)
| | | /-100+
| | | | \----- mrna18432.1-v1.0-hybrid/568-617 (21)
| | \----98----+
| | \---------- mrna07405.1-v1.0-hybrid/495-543 (39)
| |
| |---------------------------------------------- mrna00790.1-v1.0-hybrid/56-95 (12)
| |
| | /----- mrna17054.1-v1.0-hybrid/79-102 (13)
| | /----81---+
| | | \----- mrna34508.1-v1.0-hybrid/29-74 (32)
| | |
| | | /---------- mrna24821.1-v1.0-hybrid/41-88 (22)
| | | |
| |--------------54--------------+-100+ /----- mrna31407.1-v1.0-hybrid/5-52 (37)
| | | \-90-+
| | | \----- mrna26513.1-v1.0-hybrid/9-56 (51)
| | |
| | \--------------- mrna21456.1-v1.0-hybrid/453-515 (30)
| |
| | /---------- mrna26789.1-v1.0-hybrid/32-82 (24)
| | |
| | /-51-+ /----- mrna22621.1-v1.0-hybrid/12-63 (25)
| | | \-59-+
/-97-+ | /-100-+ \----- mrna24434.1-v1.0-hybrid/11-62 (42)
| | | | |
| | | | \--------------- mrna30456.1-v1.0-hybrid/9-42 (57)
| | |-----------60-----------+
| | | | /----- mrna10525.1-v1.0-hybrid/252-294 (27)
| | | \-------92------+
| | | \----- mrna17389.1-v1.0-hybrid/598-642 (35)
| | |
| | |---------------------------------------------- mrna12179.1-v1.0-hybrid/223-267 (64)
| | |
| | \---------------------------------------------- mrna27215.1-v1.0-hybrid/38-82 (65)
| |
| | /---------- mrna15159.1-v1.0-hybrid/14-57 (5)
| | |
| | /-80-+ /----- mrna14767.1-v1.0-hybrid/14-57 (41)
| | | \-54-+
| | | \----- mrna15150.1-v1.0-hybrid/5-51 (45)
| | |
| | /--53-+ /----- mrna25229.1-v1.0-hybrid/14-57 (15)
| | | | /-75-+
/-58-+ | | | | \----- mrna22167.1-v1.0-hybrid/15-58 (56)
| | | /-100+ \-80-+
| | | | | \---------- mrna25277.1-v1.0-hybrid/13-58 (61)
| | | | |
| | | | \--------------------- mrna14750.1-v1.0-hybrid/140-183 (50)
| | \------------54-----------+
| | | /---------- mrna09621.1-v1.0-hybrid/44-86 (36)
| | | |
| | \-------58------+ /----- mrna22515.1-v1.0-hybrid/39-74 (38)
| | \-100+
| | \----- mrna06793.1-v1.0-hybrid/109-144 (60)
| |
| | /------------------------------------ mrna13016.1-v1.0-hybrid/127-171 (3)
| | |
| | | /----- mrna08868.1-v1.0-hybrid/112-156 (14)
| | | /-87-+
--57-+ | | | \----- mrna25733.1-v1.0-hybrid/105-151 (31)
| | | /-62-+
| | | | | /----- mrna09510.1-v1.0-hybrid/183-227 (40)
| | | | \-96-+
| \---------99---------+ /--52-+ \----- mrna00738.1-v1.0-hybrid/95-139 (46)
| | | |
| | /-85-+ \--------------- mrna21159.1-v1.0-hybrid/105-149 (16)
| | | |
| | | \--------------------- mrna11419.1-v1.0-hybrid/122-166 (47)
| | /-53-+
| | | | /----- mrna15401.1-v1.0-hybrid/193-237 (59)
| | | \---------75---------+
| \-61-+ \----- mrna13017.1-v1.0-hybrid/115-158 (62)
| |
| \------------------------------- mrna02676.1-v1.0-hybrid/127-173 (55)
|
\-------------------------------------------------------------- mrna09296.1-v1.0-hybrid/237-281 (23)
Root part of tree:
/------------------------------------------------------------------- mrna18104.1-v1.0-hybrid/21-65 (1)
|
| /--------------------------------- (115)
|----------------99---------------+
+ \--------------------------------- mrna18602.1-v1.0-hybrid/197-223 (28)
|
| /--------------------------------- mrna19228.1-v1.0-hybrid/70-114 (10)
\----------------80---------------+
\--------------------------------- mrna13188.1-v1.0-hybrid/85-129 (29)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 105:
/----- mrna12179.1-v1.0-hybrid (2)
/-80-+
| \----- mrna22515.1-v1.0-hybrid (39)
/--------------------88-------------------+
| \---------- mrna06793.1-v1.0-hybrid (35)
|
| /----- mrna00738.1-v1.0-hybrid (3)
| /-100+
| | \----- mrna09510.1-v1.0-hybrid (4)
| /-95-+
| | | /----- mrna25733.1-v1.0-hybrid (58)
| | \-100+
| /--51-+ \----- mrna08868.1-v1.0-hybrid (63)
| | |
| /-56-+ \--------------- mrna02676.1-v1.0-hybrid (49)
| | |
| | \--------------------- mrna21159.1-v1.0-hybrid (12)
| /-91-+
| | | /----- mrna11419.1-v1.0-hybrid (8)
| | \---------53---------+
| /-52-+ \----- mrna15401.1-v1.0-hybrid (31)
| | |
| /----68---+ \------------------------------- mrna13016.1-v1.0-hybrid (59)
/-68-+ | |
| | | \------------------------------------ mrna13017.1-v1.0-hybrid (51)
| | |
| | | /--------------------- mrna09296.1-v1.0-hybrid (9)
| | | |
| | | | /---------- mrna18104.1-v1.0-hybrid (14)
| | | /---------81--------+ |
| | | | | /-98-+ /----- mrna13188.1-v1.0-hybrid (47)
| | | | | | \-100+
| | | | \--63-+ \----- mrna19228.1-v1.0-hybrid (65)
| | | | |
| | | | \--------------- mrna18602.1-v1.0-hybrid (45)
| | | |
| | | | /---------- mrna26789.1-v1.0-hybrid (10)
| | | | |
| | | | /-97-+ /----- mrna30456.1-v1.0-hybrid (50)
| | | | | \-90-+
| | |-73-+ /---------99---------+ \----- mrna22621.1-v1.0-hybrid (62)
| | | | | |
| | | | | \--------------- mrna24434.1-v1.0-hybrid (57)
| \--64-+ | |
| | | | /----- mrna17389.1-v1.0-hybrid (13)
| | | | /-----------100-----------+
| | | | | \----- mrna10525.1-v1.0-hybrid (42)
| | | | |
| | | | | /----- mrna15159.1-v1.0-hybrid (17)
| | | | | /-61-+
| | | | | | \----- mrna14767.1-v1.0-hybrid (23)
/-69-+ | \-95-+-72-+ /-94-+
| | | | | | \---------- mrna15150.1-v1.0-hybrid (26)
| | | | | /--74-+
| | | | | | \--------------- mrna25277.1-v1.0-hybrid (33)
| | | | | /-59-+
| | | | | | \--------------------- mrna14750.1-v1.0-hybrid (44)
| | | | \-95-+
| | | | | /----- mrna22167.1-v1.0-hybrid (32)
| | | | \---------52---------+
| | | | \----- mrna25229.1-v1.0-hybrid (60)
| | | |
| | | \------------------------------------ mrna27215.1-v1.0-hybrid (37)
| | |
| | \---------------------------------------------- mrna07405.1-v1.0-hybrid (25)
| |
| |--------------------------------------------------------- mrna21456.1-v1.0-hybrid (6)
| |
| | /----- mrna18432.1-v1.0-hybrid (11)
--63-+ | /-100+
| | | \----- mrna02230.1-v1.0-hybrid (20)
| |----------------------96----------------------+
| | | /----- mrna32264.1-v1.0-hybrid (18)
| | \-100+
| | \----- mrna28104.1-v1.0-hybrid (27)
| |
| | /----- mrna21830.1-v1.0-hybrid (24)
| | /-53-+
| | | \----- mrna25374.1-v1.0-hybrid (53)
| \----------------------100---------------------+
| \---------- mrna21829.1-v1.0-hybrid (55)
|
| /----- mrna05764.1-v1.0-hybrid (5)
| /-99-+
| | \----- mrna25445.1-v1.0-hybrid (40)
| /-86-+
| | \---------- mrna12682.1-v1.0-hybrid (19)
\----------------------91----------------------+
| /----- mrna05766.1-v1.0-hybrid (15)
\----55---+
\----- mrna05767.1-v1.0-hybrid (36)
Root part of tree:
/------------------------------------------------------------------- mrna19217.1-v1.0-hybrid (1)
|
|------------------------------------------------------------------- mrna35171.1-v1.0-hybrid (21)
|
| /----------- (105)
| |
| /----51----+----------- mrna10181.1-v1.0-hybrid (16)
| | |
| | \----------- mrna24516.1-v1.0-hybrid (56)
| |
| | /----------- mrna23113.1-v1.0-hybrid (22)
| |----99----+
| | \----------- mrna32606.1-v1.0-hybrid (29)
| |
| | /----------- mrna31407.1-v1.0-hybrid (34)
| |----91----+
| | \----------- mrna26513.1-v1.0-hybrid (48)
| |
+ /----51----+---------------------- mrna09621.1-v1.0-hybrid (38)
| | |
| | | /----------- mrna17054.1-v1.0-hybrid (41)
| | |----70----+
| | | \----------- mrna34508.1-v1.0-hybrid (54)
| | |
| | |---------------------- mrna13970.1-v1.0-hybrid (43)
| | |
| /-----50----+ |---------------------- mrna20578.1-v1.0-hybrid (46)
| | | |
| | | |---------------------- mrna00790.1-v1.0-hybrid (61)
| | | |
| | | \---------------------- mrna24821.1-v1.0-hybrid (64)
| /----100---+ |
| | | | /----------- mrna07484.1-v1.0-hybrid (28)
| | | \---------100---------+
| | | \----------- mrna20254.1-v1.0-hybrid (30)
\----100---+ |
| \--------------------------------------------- mrna16736.1-v1.0-hybrid (7)
|
\-------------------------------------------------------- mrna23919.1-v1.0-hybrid (52)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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