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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Castanea mollissima
Trihelix Family| Phylogenetic tree for domain ? help Back to Top |
|---|
Subtree rooted at node 64:
/----- maker-scaffold08456-augustus-gene-0.5-mRNA-1/415-497 (2)
/-100+
| \----- maker-scaffold00304-augustus-gene-0.31-mRNA-1/404-477 (14)
/-61-+
| \---------- snap_masked-scaffold22822-abinit-gene-0.2-mRNA-1/98-182 (4)
|
| /----- maker-scaffold00006-snap-gene-2.47-mRNA-1/437-522 (5)
/----------------------99----------------------+ |
| | |----- maker-scaffold07754-augustus-gene-0.5-mRNA-1/374-459 (11)
| | |
| \----57---+----- maker-scaffold00807-augustus-gene-0.24-mRNA-1/482-567 (22)
| |
| |----- maker-scaffold00051-augustus-gene-1.41-mRNA-1/510-595 (23)
| |
| \----- augustus_masked-scaffold00006-abinit-gene-2.3-mRNA-1/375-460 (29)
|
| /----------------------------------------- augustus_masked-scaffold05693-abinit-gene-0.3-mRNA-1/142-229 (3)
| |
| | /----- augustus_masked-scaffold02611-abinit-gene-0.5-mRNA-1/124-208 (12)
| | /--------------100-------------+
| | | \----- maker-scaffold00431-snap-gene-0.27-mRNA-1/79-163 (32)
| | |
| /-100+ |------------------------------------ augustus_masked-scaffold00491-abinit-gene-0.10-mRNA-1/29-112 (15)
| | | |
| | | | /----- maker-scaffold01482-augustus-gene-0.24-mRNA-1/90-191 (17)
| | | | /------100------+
| | | | | \----- maker-scaffold03619-snap-gene-0.23-mRNA-1/176-262 (20)
| | | | |
| | \-91-+ | /---------- augustus_masked-scaffold07974-abinit-gene-0.0-mRNA-1/21-106 (18)
| | | /-97-+ |
--99-+ | | | | /-100+ /----- augustus_masked-scaffold05823-abinit-gene-0.0-mRNA-1/80-171 (27)
| | | | | | \-76-+
| | | | \--76-+ \----- snap_masked-scaffold20888-abinit-gene-0.3-mRNA-1/11-70 (38)
| /--72-+ | /-67-+ |
| | | | | | \--------------- maker-scaffold09364-augustus-gene-0.6-mRNA-1/58-141 (36)
| | | | | |
| | | \-71-+ \-------------------------- snap_masked-scaffold00150-abinit-gene-0.19-mRNA-1/28-117 (28)
| | | |
| | | \------------------------------- augustus_masked-scaffold01161-abinit-gene-0.4-mRNA-1/41-131 (37)
| | |
| | | /----- augustus_masked-scaffold00371-abinit-gene-0.6-mRNA-1/120-216 (7)
| | | /-90-+
| | | | \----- augustus_masked-scaffold06030-abinit-gene-0.0-mRNA-1/117-216 (25)
| /-98-+ \----------------100----------------+
| | | \---------- augustus_masked-scaffold00006-abinit-gene-2.1-mRNA-1/121-217 (34)
| | |
| | | /----- maker-scaffold01444-snap-gene-0.26-mRNA-1/24-80 (6)
| | | /---100---+
| | | | \----- augustus_masked-scaffold00019-abinit-gene-0.5-mRNA-1/39-135 (31)
| | | |
| | | /--85-+ /----- maker-scaffold04870-augustus-gene-0.13-mRNA-1/40-134 (8)
| | | | | /-100+
| | | | | | \----- maker-scaffold08276-snap-gene-0.20-mRNA-1/44-139 (24)
\-99-+ \--------------97--------------+ \-55-+
| | \---------- maker-scaffold09288-augustus-gene-0.5-mRNA-1/39-114 (10)
| |
| \--------------------- maker-scaffold01877-snap-gene-0.19-mRNA-1/214-278 (16)
|
| /----- maker-scaffold02951-augustus-gene-0.25-mRNA-1/36-118 (33)
|-------------------------51------------------------+
| \----- maker-scaffold01594-augustus-gene-0.20-mRNA-1/84-165 (35)
|
\--------------------------------------------------------- maker-scaffold01669-snap-gene-0.31-mRNA-1/762-842 (39)
Root part of tree:
/------------------------------------------------------------------- augustus_masked-scaffold00006-abinit-gene-2.3-mRNA-1/49-132 (1)
|
|------------------------------------------------------------------- maker-scaffold00006-snap-gene-2.47-mRNA-1/65-149 (19)
|
|------------------------------------------------------------------- maker-scaffold07754-augustus-gene-0.5-mRNA-1/54-137 (21)
|
+ /--------------------------------- (64)
| |
| /-------99-------+ /----------------- maker-scaffold00304-augustus-gene-0.31-mRNA-1/112-197 (9)
| | \------100------+
| | \----------------- maker-scaffold08456-augustus-gene-0.5-mRNA-1/120-205 (13)
\-------61-------+
| /----------------- maker-scaffold00807-augustus-gene-0.24-mRNA-1/100-155 (26)
\---------------88---------------+
\----------------- maker-scaffold00051-augustus-gene-1.41-mRNA-1/96-180 (30)
|
| Phylogenetic tree for protein ? help Back to Top |
|---|
/------------------------------------------------------------------- maker-scaffold04870-augustus-gene-0.13-mRNA-1 (1)
|
|------------------------------------------------------------------- maker-scaffold08276-snap-gene-0.20-mRNA-1 (10)
|
| /------- maker-scaffold01444-snap-gene-0.26-mRNA-1 (2)
| /-------------------------100------------------------+
| | \------- augustus_masked-scaffold00019-abinit-gene-0.5-mRNA-1 (25)
| |
| | /------- maker-scaffold01482-augustus-gene-0.24-mRNA-1 (3)
| | /-100-+
| | | \------- maker-scaffold03619-snap-gene-0.23-mRNA-1 (32)
| | /--94--+
| | | \------------- maker-scaffold09364-augustus-gene-0.6-mRNA-1 (27)
| | |
| | /--99--+ /------- snap_masked-scaffold20888-abinit-gene-0.3-mRNA-1 (11)
| | | | /-100-+
| | | | | \------- augustus_masked-scaffold05823-abinit-gene-0.0-mRNA-1 (19)
+ | | \--100-+
| | | \------------- augustus_masked-scaffold07974-abinit-gene-0.0-mRNA-1 (26)
| | |
| | /-100-+ /------- augustus_masked-scaffold00491-abinit-gene-0.10-mRNA-1 (4)
| | | |--------100--------+
| | | | \------- augustus_masked-scaffold05693-abinit-gene-0.3-mRNA-1 (21)
| | | |
| | | | /------- augustus_masked-scaffold01161-abinit-gene-0.4-mRNA-1 (8)
| | /--100-+ \---------93--------+
| | | | \------- snap_masked-scaffold00150-abinit-gene-0.19-mRNA-1 (24)
| | | |
| | | | /------- augustus_masked-scaffold02611-abinit-gene-0.5-mRNA-1 (28)
| | | \-----------100-----------+
| | /--99--+ \------- maker-scaffold00431-snap-gene-0.27-mRNA-1 (31)
| | | |
| | | | /------- augustus_masked-scaffold06030-abinit-gene-0.0-mRNA-1 (7)
| | | | /--88-+
\--100-+ | | | \------- augustus_masked-scaffold00371-abinit-gene-0.6-mRNA-1 (13)
| | \------------100-----------+
| | \------------- augustus_masked-scaffold00006-abinit-gene-2.1-mRNA-1 (30)
| |
| /--96--+ /------- maker-scaffold01594-augustus-gene-0.20-mRNA-1 (5)
| | | /------------98-----------+
| | | | \------- maker-scaffold02951-augustus-gene-0.25-mRNA-1 (22)
| | | |
| | | | /--------------------------- snap_masked-scaffold22822-abinit-gene-0.2-mRNA-1 (6)
| | | | |
| | | | | /------- maker-scaffold08456-augustus-gene-0.5-mRNA-1 (9)
| | \------99-----+ |--------100--------+
| | | | \------- maker-scaffold00304-augustus-gene-0.31-mRNA-1 (20)
| | | |
| | | | /------- augustus_masked-scaffold00006-abinit-gene-2.3-mRNA-1 (14)
|--88-+ | | /--96-+
| | \--95-+ | \------- maker-scaffold07754-augustus-gene-0.5-mRNA-1 (16)
| | | /--100-+
| | | | \------------- maker-scaffold00006-snap-gene-2.47-mRNA-1 (17)
| | |--90--+
| | | \-------------------- maker-scaffold00051-augustus-gene-1.41-mRNA-1 (18)
| | |
| | |--------------------------- maker-scaffold00807-augustus-gene-0.24-mRNA-1 (15)
| | |
| | \--------------------------- maker-scaffold01669-snap-gene-0.31-mRNA-1 (29)
| |
| \------------------------------------------------------ maker-scaffold01877-snap-gene-0.19-mRNA-1 (23)
|
\------------------------------------------------------------ maker-scaffold09288-augustus-gene-0.5-mRNA-1 (12)
|
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