PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for
Raphanus raphanistrum
Trihelix Family
Phylogenetic tree for domain ? help Back to Top

      Subtree rooted at node 83:

                                                                    /----- RrC2888_p2/19-107   (2)
                                                               /-100+                 
                                                               |    \----- RrC7564_p1/19-109   (41)
                                                               |                      
                                                               |    /----- RrC7704_p2/46-139   (34)
                           /----------------100----------------+-100+                 
                           |                                   |    \----- RrC32213_p1/6-66    (47)
                           |                                   |                      
                           |                                   \---------- RrC1401_p2/60-135   (39)
                           |                                                          
                           |                                        /----- RrC14480_p1/80-161  (3)
                           |                                   /-97-+                 
                           |                                   |    \----- RrC12993_p1/75-156  (32)
                           |                        /----100---+                      
                           |                        |          \---------- RrC4027_p3/74-155   (17)
                           |                        |                                 
                           |                        |               /----- RrC4409_p2/46-107   (28)
                           |                   /-55-+          /-84-+                 
                           |                   |    |          |    \----- RrC10044_p2/46-109  (33)
                           |                   |    |     /-96-+                      
                           |                   |    |     |    \---------- RrC1953_p4/42-124   (31)
                           |    /------89------+    \-100-+                           
                     /--51-+    |              |          \--------------- RrC7688_p2/44-126   (35)
                     |     |    |              |                                      
                     |     |    |              \-------------------------- RrC2335_p3/815-895  (13)
                     |     |    |                                                     
                     |     |    |                                   /----- RrC11548_p1/392-477 (4)
                     |     |    |                         /---100---+                 
                     |     |    |                         |         \----- RrC1940_p3/372-457  (26)
                     |     |    |                         |                           
                     |     |    |                   /--97-+         /----- RrC1940_p5/308-393  (9)
                     |     |    |                   |     |    /-54-+                 
                     |     |    |                   |     |    |    \----- RrC4755_p1/409-494  (42)
                     |     |    |                   |     \-98-+                      
                     |     |    |         /----84---+          \---------- RrC16491_p1/91-176  (43)
                     |     |    |         |         |                                 
                     |     |    |         |         |               /----- RrC1612_p1/329-413  (25)
                     |     |    |         |         \------100------+                 
                     |     \-92-+         |                         \----- RrC2167_p1/410-494  (44)
                     |          |         |                                           
                     |          |         |------------------------------- RrC19400_p1/447-545 (5)
                     |          |         |                                           
                     |          |         |                         /----- RrC19400_p1/99-180  (6)
                     |          |         |                         |                 
                     |          |         |         /-------95------+----- RrC1612_p1/5-53     (18)
                /-98-+          |         |         |               |                 
                |    |          |         |         |               \----- RrC2167_p1/55-140   (36)
                |    |          |    /-63-+         |                                 
                |    |          |    |    |    /-91-+               /----- RrC1940_p3/42-125   (14)
                |    |          |    |    |    |    |     /---100---+                 
                |    |          |    |    |    |    |     |         \----- RrC11548_p1/42-126  (40)
                |    |          |    |    |    |    |     |                           
                |    |          |    |    |    |    \--95-+    /---------- RrC4755_p1/52-136   (15)
                |    |          |    |    |-96-+          |    |                      
                |    |          |    |    |    |          \-100+    /----- RrC1940_p5/1-48     (19)
                |    |          \-98-+    |    |               \-63-+                 
                |    |               |    |    |                    \----- RrC16491_p2/56-140  (23)
                |    |               |    |    |                                      
           /-68-+    |               |    |    \-------------------------- RrC5396_p2/119-204  (37)
           |    |    |               |    |                                           
           |    |    |               |    \------------------------------- RrC5396_p1/150-228  (12)
           |    |    |               |                                                
           |    |    |               \------------------------------------ RrC6027_p1/272-354  (46)
           |    |    |                                                                
           |    |    |                                              /----- RrC6345_p2/101-195  (16)
           |    |    |                                         /-97-+                 
           |    |    |                                         |    \----- RrC2081_p2/88-181   (22)
           |    |    \-------------------100-------------------+                      
           |    |                                              \---------- RrC313_p13/125-230  (30)
      --54-+    |                                                                     
           |    \--------------------------------------------------------- RrC658_p2/90-172    (45)
           |                                                                          
           |                                                        /----- RrC16090_p1/33-105  (7)
           |                                              /----97---+                 
           |                                              |         \----- RrC739_p5/36-118    (21)
           |                                              |                           
           |                                              |         /----- RrC6250_p3/1-41     (10)
           |                                              |    /-95-+                 
           |                                              |    |    \----- RrC33619_p1/47-138  (11)
           \----------------------74----------------------+-76-+                      
                                                          |    |    /----- RrC4426_p1/159-245  (24)
                                                          |    \-86-+                 
                                                          |         \----- RrC1743_p1/41-124   (27)
                                                          |                           
                                                          \--------------- RrC2290_p3/27-118   (38)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- RrC2481_p1/63-151   (1)
      |                                                                               
      |                                 /--------------------------------- (83)
      |----------------93---------------+                                             
      +                                 \--------------------------------- RrC7661_p2/2-70     (29)
      |                                                                               
      |                                 /--------------------------------- RrC9138_p2/71-158   (8)
      \----------------81---------------+                                             
                                        \--------------------------------- RrC40581_p1/51-109  (20)
                                                                                      

Phylogenetic tree for protein ? help Back to Top

      /------------------------------------------------------------------- RrC7661_p2  (1)
      |                                                                               
      |                                                             /----- RrC40581_p1 (6)
      |                                                        /-68-+                 
      |                                                        |    \----- RrC2481_p1  (21)
      |---------------------------99---------------------------+                      
      |                                                        \---------- RrC9138_p2  (40)
      |                                                                               
      |                                                             /----- RrC2888_p2  (2)
      |                                                   /---100---+                 
      |                                                   |         \----- RrC7564_p1  (16)
      |                                                   |                           
      |                    /--------------100-------------+         /----- RrC32213_p1 (10)
      |                    |                              |    /-100+                 
      |                    |                              |    |    \----- RrC7704_p2  (26)
      |                    |                              \-83-+                      
      |                    |                                   \---------- RrC1401_p2  (39)
      |                    |                                                          
      |                    |                        /--------------------- RrC2335_p3  (4)
      |                    |                        |                                 
      |                    |                        |          /---------- RrC1953_p4  (11)
      |                    |                   /-67-+          |                      
      |                    |                   |    |     /-99-+    /----- RrC10044_p2 (12)
      |                    |                   |    |     |    \-100+                 
      |                    |                   |    \-100-+         \----- RrC4409_p2  (36)
      |                    |                   |          |                           
      |                    |---------84--------+          \--------------- RrC7688_p2  (19)
      |                    |                   |                                      
      |                    |                   |               /---------- RrC4027_p3  (8)
      |                    |                   |               |                      
      |                    |                   \------100------+    /----- RrC14480_p1 (14)
      |                    |                                   \-93-+                 
      |                    |                                        \----- RrC12993_p1 (18)
      |                    |                                                          
      |                    |                                        /----- RrC1940_p3  (5)
      +              /-100-+                        /------100------+                 
      |              |     |                        |               \----- RrC11548_p1 (22)
      |              |     |                        |                                 
      |              |     |                        |               /----- RrC16491_p2 (9)
      |              |     |                   /-74-+          /-50-+                 
      |              |     |                   |    |          |    \----- RrC16491_p1 (29)
      |              |     |                   |    |     /-97-+                      
      |              |     |                   |    |     |    \---------- RrC4755_p1  (17)
      |              |     |                   |    \-100-+                           
      |              |     |              /-86-+          \--------------- RrC1940_p5  (38)
      |              |     |              |    |                                      
      |              |     |              |    |                    /----- RrC2167_p1  (23)
      |              |     |              |    |               /-100+                 
      |              |     |         /-70-+    |               |    \----- RrC1612_p1  (34)
      |              |     |         |    |    \-------82------+                      
      |              |     |         |    |                    \---------- RrC5396_p1  (33)
      |              |     |         |    |                                           
      |         /-86-+     |    /-95-+    \------------------------------- RrC5396_p2  (15)
      |         |    |     |    |    |                                                
      |         |    |     |    |    |                              /----- RrC19400_p1 (25)
      |         |    |     |    |    \--------------64--------------+                 
      |         |    |     |    |                                   \----- RrC6027_p1  (27)
      |         |    |     \-100+                                                     
      |         |    |          |                                   /----- RrC6345_p2  (13)
      |         |    |          |                              /-100+                 
      |         |    |          |                              |    \----- RrC2081_p2  (31)
      |         |    |          \--------------100-------------+                      
      |    /-78-+    |                                         \---------- RrC313_p13  (32)
      |    |    |    |                                                                
      |    |    |    |                                              /----- RrC1743_p1  (7)
      |    |    |    |----------------------97----------------------+                 
      |    |    |    |                                              \----- RrC4426_p1  (37)
      |    |    |    |                                                                
      |    |    |    \---------------------------------------------------- RrC33619_p1 (35)
      |    |    |                                                                     
      \-91-+    |                                                   /----- RrC6250_p3  (20)
           |    \-------------------------61------------------------+                 
           |                                                        \----- RrC658_p2   (28)
           |                                                                          
           |                                                        /----- RrC16090_p1 (3)
           |                                                   /-100+                 
           |                                                   |    \----- RrC739_p5   (30)
           \------------------------100------------------------+                      
                                                               \---------- RrC2290_p3  (24)