PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Phylogenetic Tree for
Castanea mollissima
WRKY Family
Phylogenetic tree for domain ? help Back to Top 

      /------------------------------------------------------------------- maker-scaffold02975-augustus-gene-0.24-mRNA-1/244-300        (1)
      |                                                                               
      |------------------------------------------------------------------- maker-scaffold01919-snap-gene-0.23-mRNA-1/230-287            (51)
      |                                                                               
      |                                                 /----------------- maker-scaffold00068-augustus-gene-1.31-mRNA-1/360-416        (22)
      |                                                 |                             
      |------------------------83-----------------------+        /-------- snap_masked-scaffold16511-abinit-gene-0.5-mRNA-1/163-220     (57)
      |                                                 \---100--+                    
      |                                                          \-------- maker-scaffold17244-snap-gene-0.11-mRNA-1/162-218            (61)
      |                                                                               
      |                                                 /----------------- augustus_masked-scaffold08006-abinit-gene-0.0-mRNA-1/196-252 (11)
      |                                                 |                             
      |------------------------82-----------------------+        /-------- maker-scaffold09377-augustus-gene-0.7-mRNA-1/261-318         (64)
      |                                                 \---99---+                    
      |                                                          \-------- maker-scaffold01472-snap-gene-0.43-mRNA-1/250-307            (69)
      |                                                                               
      |                                                          /-------- maker-scaffold01816-augustus-gene-0.19-mRNA-1/185-242        (2)
      |                                                 /---78---+                    
      |                                                 |        \-------- maker-scaffold07078-augustus-gene-0.14-mRNA-1/171-228        (8)
      |                                         /---54--+                             
      |                                         |       \----------------- maker-scaffold01373-augustus-gene-0.36-mRNA-1/154-211        (67)
      |                /-----------77-----------+                                     
      |                |                        \------------------------- maker-scaffold05544-augustus-gene-0.8-mRNA-1/166-223         (45)
      |                |                                                              
      |                |                                         /-------- maker-scaffold00249-snap-gene-0.32-mRNA-1/191-250            (3)
      |                |                                         |                    
      |                |                                         |-------- maker-scaffold00269-snap-gene-0.33-mRNA-1/256-298            (14)
      |                |                        /-------74-------+                    
      |                |                        |                |-------- maker-scaffold03895-snap-gene-0.20-mRNA-1/168-226            (29)
      |                |                        |                |                    
      |                |                        |                \-------- maker-scaffold01493-augustus-gene-0.32-mRNA-1/152-211        (48)
      |                |                        |                                     
      |                |                        |------------------------- maker-scaffold23759-augustus-gene-0.2-mRNA-1/3-61            (9)
      |                |                        |                                     
      |                |                        |                /-------- maker-scaffold00097-snap-gene-1.26-mRNA-1/116-175            (25)
      |                |                        |       /---99---+                    
      |                |                        |       |        \-------- augustus_masked-scaffold00527-abinit-gene-0.1-mRNA-1/153-212 (73)
      |                |-----------100----------+--100--+                             
      |                |                        |       \----------------- maker-scaffold00097-augustus-gene-1.22-mRNA-1/97-156         (71)
      |                |                        |                                     
      |                |                        |------------------------- maker-scaffold08299-augustus-gene-0.10-mRNA-1/282-340        (46)
      |                |                        |                                     
      |                |                        |------------------------- maker-scaffold00678-augustus-gene-0.21-mRNA-1/300-358        (53)
      |                |                        |                                     
      |                |                        |------------------------- maker-scaffold02524-snap-gene-0.28-mRNA-1/2-60               (59)
      |                |                        |                                     
      |                |                        \------------------------- maker-scaffold06585-augustus-gene-0.9-mRNA-1/353-411         (65)
      |                |                                                              
      |                |                                         /-------- maker-scaffold03566-snap-gene-0.12-mRNA-1/156-214            (4)
      |                |--------------------99-------------------+                    
      |                |                                         \-------- maker-scaffold00027-augustus-gene-1.27-mRNA-1/155-213        (33)
      |                |                                                              
      |                |                                /----------------- maker-scaffold01338-snap-gene-0.46-mRNA-1/145-205            (5)
      |                |                                |                             
      |                |                                |        /-------- maker-scaffold16189-augustus-gene-0.2-mRNA-1/122-183         (39)
      +                |                                |        |                    
      |                |                                |---59---+-------- augustus_masked-scaffold01416-abinit-gene-0.6-mRNA-1/132-192 (62)
      |                |---------------100--------------+        |                    
      |                |                                |        \-------- maker-scaffold02441-augustus-gene-0.13-mRNA-1/131-192        (70)
      |                |                                |                             
      |                |                                |        /-------- maker-scaffold01338-augustus-gene-0.35-mRNA-1/135-195        (47)
      |                |                                \---98---+                    
      |                |                                         \-------- maker-scaffold11127-augustus-gene-0.5-mRNA-1/142-202         (68)
      |                |                                                              
      |                |-------------------------------------------------- maker-scaffold09859-augustus-gene-0.11-mRNA-1/173-231        (6)
      |                |                                                              
      |                |                                /----------------- maker-scaffold01463-snap-gene-0.38-mRNA-1/266-323            (7)
      |                |                                |                             
      |                |                        /---99--+        /-------- maker-scaffold05135-augustus-gene-0.5-mRNA-1/277-334         (56)
      |                |                        |       \---79---+                    
      |                |                        |                \-------- maker-scaffold03409-augustus-gene-0.16-mRNA-1/257-314        (60)
      |                |                /---61--+                                     
      |                |                |       |------------------------- maker-scaffold00305-augustus-gene-1.15-mRNA-1/192-249        (12)
      |                |                |       |                                     
      |                |       /---64---+       \------------------------- maker-scaffold01583-snap-gene-0.20-mRNA-1/257-315            (20)
      |                |       |        |                                             
      |       /---55---+       |        \--------------------------------- maker-scaffold09518-snap-gene-0.7-mRNA-1/267-324             (37)
      |       |        |       |                                                      
      |       |        |       |                /------------------------- maker-scaffold14802-snap-gene-0.6-mRNA-1/126-184             (18)
      |       |        |       |                |                                     
      |       |        |---98--+                |       /----------------- snap_masked-scaffold07971-abinit-gene-0.2-mRNA-1/10-68       (21)
      |       |        |       |        /---72--+       |                             
      |       |        |       |        |       |       |----------------- maker-scaffold12041-augustus-gene-0.11-mRNA-1/53-111         (24)
      |       |        |       |        |       \---68--+                             
      |       |        |       |        |               |        /-------- maker-scaffold01178-augustus-gene-0.35-mRNA-1/178-236        (31)
      |       |        |       \---98---+               \---89---+                    
      |       |        |                |                        \-------- augustus_masked-scaffold05635-abinit-gene-0.1-mRNA-1/178-236 (41)
      |       |        |                |                                             
      |       |        |                |                        /-------- augustus_masked-scaffold14918-abinit-gene-0.1-mRNA-1/72-92   (42)
      |       |        |                \-----------61-----------+                    
      |       |        |                                         \-------- maker-scaffold22344-augustus-gene-0.2-mRNA-1/82-140          (52)
      |       |        |                                                              
      |       |        |-------------------------------------------------- maker-scaffold03354-snap-gene-0.28-mRNA-1/407-465            (10)
      |       |        |                                                              
      |       |        |-------------------------------------------------- augustus_masked-scaffold08006-abinit-gene-0.0-mRNA-1/396-416 (13)
      |       |        |                                                              
      |       |        |                                /----------------- maker-scaffold00281-snap-gene-0.36-mRNA-1/89-147             (16)
      |       |        |                                |                             
      |       |        |                        /---98--+        /-------- maker-scaffold04189-snap-gene-0.19-mRNA-1/99-157             (28)
      |       |        |                        |       \---100--+                    
      |       |        |-----------91-----------+                \-------- maker-scaffold04858-snap-gene-0.9-mRNA-1/102-160             (32)
      |       |        |                        |                                     
      |       |        |                        \------------------------- maker-scaffold01425-augustus-gene-0.41-mRNA-1/107-165        (44)
      |       |        |                                                              
      |       |        |-------------------------------------------------- maker-scaffold01162-augustus-gene-0.26-mRNA-1/175-233        (17)
      |       |        |                                                              
      |       |        |                                         /-------- maker-scaffold00068-augustus-gene-1.31-mRNA-1/574-632        (19)
      |       |        |                                /---84---+                    
      |       |        |                                |        \-------- maker-scaffold02975-augustus-gene-0.24-mRNA-1/460-518        (40)
      |       |        |---------------91---------------+                             
      \---57--+        |                                |        /-------- maker-scaffold09377-augustus-gene-0.7-mRNA-1/431-489         (34)
              |        |                                \---86---+                    
              |        |                                         \-------- maker-scaffold01472-snap-gene-0.43-mRNA-1/416-474            (43)
              |        |                                                              
              |        |-------------------------------------------------- maker-scaffold01722-augustus-gene-0.33-mRNA-1/288-346        (26)
              |        |                                                              
              |        |-------------------------------------------------- maker-scaffold01919-snap-gene-0.23-mRNA-1/403-461            (27)
              |        |                                                              
              |        |-------------------------------------------------- maker-scaffold00058-snap-gene-0.45-mRNA-1/384-440            (35)
              |        |                                                              
              |        |                                         /-------- maker-scaffold01917-snap-gene-0.27-mRNA-1/123-181            (38)
              |        |-------------------100-------------------+                    
              |        |                                         \-------- maker-scaffold06655-augustus-gene-0.12-mRNA-1/93-151         (58)
              |        |                                                              
              |        |-------------------------------------------------- augustus_masked-scaffold06584-abinit-gene-0.2-mRNA-1/175-196 (49)
              |        |                                                              
              |        |-------------------------------------------------- augustus_masked-scaffold15802-abinit-gene-0.0-mRNA-1/262-282 (50)
              |        |                                                              
              |        |-------------------------------------------------- augustus_masked-scaffold00774-abinit-gene-0.4-mRNA-1/105-126 (54)
              |        |                                                              
              |        \-------------------------------------------------- maker-scaffold01735-augustus-gene-0.32-mRNA-1/113-169        (66)
              |                                                                       
              |----------------------------------------------------------- maker-scaffold03354-snap-gene-0.28-mRNA-1/222-278            (15)
              |                                                                       
              |                                                  /-------- maker-scaffold09859-augustus-gene-0.11-mRNA-1/3-58           (23)
              |                                                  |                    
              |------------------------79------------------------+-------- augustus_masked-scaffold15802-abinit-gene-0.0-mRNA-1/90-146  (36)
              |                                                  |                    
              |                                                  \-------- maker-scaffold00058-snap-gene-0.45-mRNA-1/221-277            (55)
              |                                                                       
              |                                                  /-------- snap_masked-scaffold16511-abinit-gene-0.5-mRNA-1/29-85       (30)
              |------------------------100-----------------------+                    
              |                                                  \-------- maker-scaffold17244-snap-gene-0.11-mRNA-1/28-84              (63)
              |                                                                       
              \----------------------------------------------------------- maker-scaffold01722-augustus-gene-0.33-mRNA-1/113-170        (72)
Phylogenetic tree for protein ? help Back to Top 

      Subtree rooted at node 111:

                                                               /---------- snap_masked-scaffold07971-abinit-gene-0.2-mRNA-1     (2)
                                                               |                      
                                                          /-80-+    /----- maker-scaffold01178-augustus-gene-0.35-mRNA-1        (10)
                                                          |    \-100+                 
                                                    /--99-+         \----- augustus_masked-scaffold05635-abinit-gene-0.1-mRNA-1 (25)
                                                    |     |                           
                                               /-95-+     \--------------- maker-scaffold14802-snap-gene-0.6-mRNA-1             (46)
                                               |    |                                 
                                               |    \--------------------- maker-scaffold12041-augustus-gene-0.11-mRNA-1        (60)
                                          /-100+                                      
                                          |    |                    /----- augustus_masked-scaffold14918-abinit-gene-0.1-mRNA-1 (11)
                                          |    \---------99---------+                 
                                          |                         \----- maker-scaffold22344-augustus-gene-0.2-mRNA-1         (54)
                                          |                                           
                                          |                         /----- maker-scaffold09518-snap-gene-0.7-mRNA-1             (9)
                                     /-97-+               /---100---+                 
                                     |    |               |         \----- maker-scaffold00305-augustus-gene-1.15-mRNA-1        (52)
                                     |    |               |                           
                                     |    |         /--84-+         /----- maker-scaffold05135-augustus-gene-0.5-mRNA-1         (20)
                                     |    |         |     |    /-99-+                 
                                     |    |         |     |    |    \----- maker-scaffold01463-snap-gene-0.38-mRNA-1            (36)
                                     |    \----99---+     \-99-+                      
                                     |              |          \---------- maker-scaffold03409-augustus-gene-0.16-mRNA-1        (33)
                                     |              |                                 
                                /-99-+              \--------------------- maker-scaffold01583-snap-gene-0.20-mRNA-1            (43)
                                |    |                                                
                                |    |                              /----- maker-scaffold11127-augustus-gene-0.5-mRNA-1         (13)
                                |    |                    /---100---+                 
                                |    |                    |         \----- maker-scaffold01338-augustus-gene-0.35-mRNA-1        (50)
                                |    |                    |                           
                                |    |              /--99-+    /---------- maker-scaffold02441-augustus-gene-0.13-mRNA-1        (23)
                                |    |              |     |    |                      
                                |    |              |     \-91-+    /----- maker-scaffold16189-augustus-gene-0.2-mRNA-1         (40)
                                |    \------99------+          \-89-+                 
                                |                   |               \----- augustus_masked-scaffold01416-abinit-gene-0.6-mRNA-1 (55)
                                |                   |                                 
                           /-96-+                   \--------------------- maker-scaffold01338-snap-gene-0.46-mRNA-1            (39)
                           |    |                                                     
                           |    |                              /---------- maker-scaffold00097-augustus-gene-1.22-mRNA-1        (14)
                           |    |                              |                      
                           |    |              /------100------+    /----- augustus_masked-scaffold00527-abinit-gene-0.1-mRNA-1 (29)
                           |    |              |               \-100+                 
                           |    |              |                    \----- maker-scaffold00097-snap-gene-1.26-mRNA-1            (42)
                           |    |              |                                      
                           |    |              |               /---------- maker-scaffold01493-augustus-gene-0.32-mRNA-1        (17)
                           |    |              |               |                      
                           |    |              |          /-100+    /----- maker-scaffold00249-snap-gene-0.32-mRNA-1            (27)
                           |    \------100-----+          |    \-95-+                 
                           |                   |    /-100-+         \----- maker-scaffold03895-snap-gene-0.20-mRNA-1            (41)
                           |                   |    |     |                           
                           |                   |    |     \--------------- maker-scaffold00269-snap-gene-0.33-mRNA-1            (47)
                           |                   |    |                                 
                           |                   |    |               /----- maker-scaffold00678-augustus-gene-0.21-mRNA-1        (18)
                           |                   \-100+          /-82-+                 
                           |                        |          |    \----- maker-scaffold06585-augustus-gene-0.9-mRNA-1         (58)
                           |                        |     /-100+                      
                           |                        |     |    \---------- maker-scaffold23759-augustus-gene-0.2-mRNA-1         (31)
                           |                        \--99-+                           
                           |                              |         /----- maker-scaffold02524-snap-gene-0.28-mRNA-1            (26)
                     /--80-+                              \----99---+                 
                     |     |                                        \----- maker-scaffold08299-augustus-gene-0.10-mRNA-1        (32)
                     |     |                                                          
                     |     |                                   /---------- maker-scaffold00058-snap-gene-0.45-mRNA-1            (3)
                     |     |                                   |                      
                     |     |                   /-------50------+    /----- maker-scaffold01919-snap-gene-0.23-mRNA-1            (37)
                     |     |                   |               \-52-+                 
                     |     |                   |                    \----- maker-scaffold01722-augustus-gene-0.33-mRNA-1        (48)
                     |     |                   |                                      
                     |     |                   |                    /----- maker-scaffold03354-snap-gene-0.28-mRNA-1            (4)
                     |     |              /-63-+    /------100------+                 
                     |     |              |    |    |               \----- augustus_masked-scaffold06584-abinit-gene-0.2-mRNA-1 (35)
                     |     |              |    |    |                                 
                     |     |              |    |    |               /----- augustus_masked-scaffold15802-abinit-gene-0.0-mRNA-1 (8)
                     |     |              |    |    |          /-100+                 
                     |     |              |    \-58-+          |    \----- augustus_masked-scaffold08006-abinit-gene-0.0-mRNA-1 (16)
                /-56-+     |              |         |     /-100+                      
                |    |     |         /-78-+         |     |    |    /----- maker-scaffold17244-snap-gene-0.11-mRNA-1            (38)
                |    |     |         |    |         |     |    \-100+                 
                |    |     |         |    |         \--62-+         \----- snap_masked-scaffold16511-abinit-gene-0.5-mRNA-1     (53)
                |    |     |         |    |               |                           
                |    |     |         |    |               \--------------- maker-scaffold09859-augustus-gene-0.11-mRNA-1        (28)
                |    |     |         |    |                                           
                |    |     \---100---+    |                         /----- maker-scaffold00068-augustus-gene-1.31-mRNA-1        (19)
                |    |               |    \------------99-----------+                 
                |    |               |                              \----- maker-scaffold02975-augustus-gene-0.24-mRNA-1        (30)
                |    |               |                                                
                |    |               |                              /----- maker-scaffold01472-snap-gene-0.43-mRNA-1            (12)
                |    |               \--------------100-------------+                 
           /-50-+    |                                              \----- maker-scaffold09377-augustus-gene-0.7-mRNA-1         (51)
           |    |    |                                                                
           |    |    |                                              /----- maker-scaffold06655-augustus-gene-0.12-mRNA-1        (6)
           |    |    \----------------------100---------------------+                 
           |    |                                                   \----- maker-scaffold01917-snap-gene-0.27-mRNA-1            (34)
           |    |                                                                     
           |    |                                                   /----- maker-scaffold01816-augustus-gene-0.19-mRNA-1        (5)
           |    |                                              /-100+                 
           |    |                                              |    \----- maker-scaffold07078-augustus-gene-0.14-mRNA-1        (57)
           |    |                                              |                      
      --70-+    |                                              |    /----- maker-scaffold01162-augustus-gene-0.26-mRNA-1        (24)
           |    |                                              |-55-+                 
           |    \----------------------64----------------------+    \----- maker-scaffold01373-augustus-gene-0.36-mRNA-1        (44)
           |                                                   |                      
           |                                                   |---------- maker-scaffold01735-augustus-gene-0.32-mRNA-1        (45)
           |                                                   |                      
           |                                                   \---------- maker-scaffold05544-augustus-gene-0.8-mRNA-1         (49)
           |                                                                          
           |                                                        /----- maker-scaffold03566-snap-gene-0.12-mRNA-1            (21)
           \---------------------------100--------------------------+                 
                                                                    \----- maker-scaffold00027-augustus-gene-1.27-mRNA-1        (56)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- maker-scaffold00281-snap-gene-0.36-mRNA-1            (1)
      |                                                                               
      |                     /--------------------------------------------- (111)
      |                     |                                                         
      |---------100---------+                      /---------------------- maker-scaffold01425-augustus-gene-0.41-mRNA-1        (7)
      +                     \----------65----------+                                  
      |                                            \---------------------- augustus_masked-scaffold00774-abinit-gene-0.4-mRNA-1 (15)
      |                                                                               
      |                                            /---------------------- maker-scaffold04858-snap-gene-0.9-mRNA-1             (22)
      \---------------------99---------------------+                                  
                                                   \---------------------- maker-scaffold04189-snap-gene-0.19-mRNA-1            (59)