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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for
Castanea mollissima
bHLH Family| Phylogenetic tree for domain ? help Back to Top |
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Subtree rooted at node 143:
/---------------------------------------------- maker-scaffold00038-augustus-gene-0.37-mRNA-1/57-99 (2)
|
| /----- maker-scaffold11285-snap-gene-0.6-mRNA-1/163-207 (3)
| /-100+
| | \----- maker-scaffold04445-augustus-gene-0.11-mRNA-1/168-211 (57)
| |
| /-100+---------- maker-scaffold11351-snap-gene-0.3-mRNA-1/364-406 (14)
| | |
|--------------91--------------+ \---------- maker-scaffold07271-snap-gene-0.9-mRNA-1/344-386 (72)
| |
| \--------------- maker-scaffold06487-snap-gene-0.15-mRNA-1/289-343 (12)
|
|---------------------------------------------- maker-scaffold01138-snap-gene-0.38-mRNA-1/449-482 (4)
|
| /----- maker-scaffold01763-augustus-gene-0.32-mRNA-1/128-179 (5)
| /-51-+
| | \----- maker-scaffold04193-snap-gene-0.13-mRNA-1/131-182 (28)
| /-91-+
| | \---------- maker-scaffold10265-snap-gene-0.9-mRNA-1/124-175 (11)
| |
| | /----- maker-scaffold00644-augustus-gene-0.49-mRNA-1/207-258 (31)
| /--75-+----59---+
| | | \----- maker-scaffold03576-snap-gene-0.15-mRNA-1/97-148 (59)
| | |
| /------100-----+ \--------------- maker-scaffold03647-augustus-gene-0.25-mRNA-1/194-245 (73)
| | |
| | \--------------------- maker-scaffold02441-snap-gene-0.18-mRNA-1/103-154 (34)
| |
| | /----- maker-scaffold00915-snap-gene-0.29-mRNA-1/44-95 (8)
| | /-84-+
| | | \----- maker-scaffold00915-augustus-gene-0.28-mRNA-1/44-95 (97)
| | /-100+
| | | \---------- maker-scaffold00715-augustus-gene-0.35-mRNA-1/50-101 (80)
| | /----100---+
| /-61-+ | \--------------- maker-scaffold00442-snap-gene-1.11-mRNA-1/69-121 (45)
| | | |
| | | | /----- maker-scaffold11229-augustus-gene-0.6-mRNA-1/68-120 (16)
| | | /-86-+ /------100------+
| | | | | | \----- augustus_masked-scaffold06142-abinit-gene-0.0-mRNA-1/71-123 (77)
| | | | | |
| | | | | | /----- augustus_masked-scaffold03010-abinit-gene-0.0-mRNA-1/19-59 (19)
| | | | \-60-+ /-98-+
| | | | | | \----- maker-scaffold02164-snap-gene-0.14-mRNA-1/18-57 (38)
| | | | | /-100+
|-53-+ \-100+ | | \---------- maker-scaffold03760-augustus-gene-0.13-mRNA-1/13-53 (53)
| | | \--71-+
| | | | /----- maker-scaffold07037-snap-gene-0.9-mRNA-1/9-60 (22)
/--88-+ | | \----95---+
| | | | \----- maker-scaffold18485-snap-gene-0.2-mRNA-1/15-63 (58)
| | | |
| | | | /----- maker-scaffold06761-snap-gene-0.9-mRNA-1/33-77 (40)
| | | \-----------100-----------+
| | | \----- maker-scaffold00334-snap-gene-1.25-mRNA-1/97-140 (98)
| | |
| | \----------------------------------------- augustus_masked-scaffold00099-abinit-gene-1.0-mRNA-1/268-314 (15)
| |
| |---------------------------------------------- maker-scaffold07473-snap-gene-0.12-mRNA-1/429-475 (9)
| |
| |---------------------------------------------- maker-scaffold01663-augustus-gene-0.33-mRNA-1/482-528 (13)
| |
| |---------------------------------------------- maker-scaffold01868-augustus-gene-0.12-mRNA-1/8-43 (20)
| |
| | /----- maker-scaffold07332-augustus-gene-0.14-mRNA-1/336-380 (25)
| | /-99-+
| | | \----- maker-scaffold16924-snap-gene-0.3-mRNA-1/335-379 (42)
| |-----------------97----------------+
| | \---------- maker-scaffold00868-augustus-gene-0.31-mRNA-1/91-134 (52)
| |
| | /---------- maker-scaffold19727-augustus-gene-0.2-mRNA-1/173-216 (30)
| | |
| |-----------------55----------------+ /----- maker-scaffold04460-augustus-gene-0.17-mRNA-1/40-85 (44)
| | \-67-+
| | \----- maker-scaffold00458-snap-gene-0.40-mRNA-1/297-340 (94)
| |
/-87-+ | /----- maker-scaffold01695-augustus-gene-0.23-mRNA-1/40-63 (35)
| | | /-56-+
| | | | \----- maker-scaffold03012-snap-gene-0.27-mRNA-1/50-97 (85)
| | |----------------100----------------+
| | | \---------- maker-scaffold00289-augustus-gene-0.31-mRNA-1/80-127 (66)
| | |
| | | /---------- augustus_masked-scaffold01491-abinit-gene-0.3-mRNA-1/515-560 (47)
| | | |
| | | /-99-+ /----- augustus_masked-scaffold01291-abinit-gene-0.8-mRNA-1/327-372 (68)
| | | | \-96-+
| | | | \----- augustus_masked-scaffold15592-abinit-gene-0.0-mRNA-1/296-341 (96)
| | |--------------100-------------+
| | | |--------------- augustus_masked-scaffold01197-abinit-gene-0.14-mRNA-1/361-407 (48)
| | | |
| | | \--------------- augustus_masked-scaffold00294-abinit-gene-1.10-mRNA-1/442-488 (56)
| | |
| | | /----- maker-scaffold03116-snap-gene-0.21-mRNA-1/177-223 (69)
| | | /-99-+
/-92-+ | | | \----- augustus_masked-scaffold05011-abinit-gene-0.2-mRNA-1/165-212 (88)
| | | \----------------100----------------+
| | | \---------- snap_masked-scaffold02766-abinit-gene-0.16-mRNA-1/182-228 (91)
| | |
| | | /---------- maker-scaffold00859-augustus-gene-0.50-mRNA-1/72-118 (6)
| | | |
| | | | /----- maker-scaffold02032-augustus-gene-0.12-mRNA-1/68-114 (23)
| | | |-91-+
| | | | \----- maker-scaffold11720-augustus-gene-0.4-mRNA-1/132-178 (67)
| | \--------------------96-------------------+
| | |---------- augustus_masked-scaffold00059-abinit-gene-0.2-mRNA-1/60-106 (26)
| | |
| | |---------- maker-scaffold03159-snap-gene-0.20-mRNA-1/85-131 (84)
| | |
--70-+ | \---------- maker-scaffold07299-augustus-gene-0.21-mRNA-1/71-118 (90)
| |
| | /----- maker-scaffold00681-snap-gene-0.20-mRNA-1/282-331 (55)
| \------------------------100------------------------+
| \----- maker-scaffold04425-augustus-gene-0.12-mRNA-1/15-64 (71)
|
| /----- snap_masked-scaffold02297-abinit-gene-0.23-mRNA-1/49-95 (17)
| /-63-+
| | \----- maker-scaffold04101-snap-gene-0.20-mRNA-1/343-389 (81)
| /-86-+
| | \---------- maker-scaffold01436-augustus-gene-0.28-mRNA-1/478-524 (33)
| |
| | /----- maker-scaffold10205-augustus-gene-0.7-mRNA-1/176-221 (24)
\----------------------99----------------------+---100---+
| \----- maker-scaffold07211-snap-gene-0.10-mRNA-1/260-305 (64)
|
| /----- maker-scaffold10290-snap-gene-0.10-mRNA-1/155-201 (65)
\---100---+
\----- maker-scaffold09854-augustus-gene-0.9-mRNA-1/128-173 (76)
Root part of tree:
/------------------------------------------------------------------- augustus_masked-scaffold00098-abinit-gene-0.10-mRNA-1/299-336 (1)
|
| /------ maker-scaffold03290-snap-gene-0.24-mRNA-1/211-249 (86)
|-----------------------------99-----------------------------+
| \------ maker-scaffold02342-augustus-gene-0.19-mRNA-1/191-229 (87)
|
| /------------------------------------- (143)
| |
| | /------------------------ augustus_masked-scaffold00495-abinit-gene-0.6-mRNA-1/379-427 (32)
| | |
| | | /------ maker-scaffold03962-augustus-gene-0.15-mRNA-1/165-212 (36)
| | | /--63-+
| | | | \------ maker-scaffold03443-augustus-gene-0.17-mRNA-1/155-181 (51)
| | | /--83-+
| | | | \------------ maker-scaffold03167-augustus-gene-0.16-mRNA-1/194-241 (46)
| /--89-+ | |
| | | |--50-+------------------ maker-scaffold11782-augustus-gene-0.3-mRNA-1/326-373 (79)
| | | /-100-+ |
| | | | | \------------------ augustus_masked-scaffold08631-abinit-gene-0.0-mRNA-1/178-225 (95)
| | | | |
| | | | |------------------------ maker-scaffold02563-augustus-gene-0.16-mRNA-1/273-321 (50)
| | | | |
| | | | |------------------------ maker-scaffold05644-snap-gene-0.15-mRNA-1/370-417 (54)
| | | | |
| | \--65--+ |------------------------ maker-scaffold00344-augustus-gene-0.29-mRNA-1/249-296 (82)
| | | |
| /--57-+ | \------------------------ maker-scaffold05038-snap-gene-0.15-mRNA-1/165-187 (89)
| | | |
| | | | /------------ maker-scaffold12866-augustus-gene-0.2-mRNA-1/268-313 (41)
| | | | |
| | | \--------76-------+ /------ maker-scaffold00256-snap-gene-1.21-mRNA-1/199-243 (74)
+ | | \--99-+
| | | \------ maker-scaffold11803-augustus-gene-0.7-mRNA-1/199-243 (93)
| | |
| | | /------------------ maker-scaffold02381-snap-gene-0.26-mRNA-1/214-259 (7)
| | | |
| | | | /------------ maker-scaffold09972-augustus-gene-0.4-mRNA-1/343-388 (21)
| | \-----------100----------+ |
| | | |------------ maker-scaffold13555-augustus-gene-0.6-mRNA-1/323-368 (29)
| | \-100-+
| | | /------ maker-scaffold00270-augustus-gene-0.24-mRNA-1/397-436 (70)
| | \--99-+
| | \------ maker-scaffold06320-augustus-gene-0.9-mRNA-1/347-392 (83)
| /--99-+
| | | /------------ augustus_masked-scaffold00662-abinit-gene-0.3-mRNA-1/169-209 (27)
| | | |
| | | /--89-+ /------ snap_masked-scaffold02634-abinit-gene-0.17-mRNA-1/57-97 (60)
| | | | \--93-+
| | | | \------ augustus_masked-scaffold07645-abinit-gene-0.4-mRNA-1/153-193 (62)
| | | |
| | | | /------ augustus_masked-scaffold01414-abinit-gene-0.4-mRNA-1/172-216 (43)
| | | /--72-+----100----+
| | | | | \------ maker-scaffold08166-snap-gene-0.12-mRNA-1/58-102 (78)
| /--78-+ | | |
| | | | | |------------------ augustus_masked-scaffold03749-abinit-gene-0.0-mRNA-1/374-414 (61)
| | | |-----------68-----------+ |
| | | | | \------------------ augustus_masked-scaffold09356-abinit-gene-0.1-mRNA-1/47-87 (63)
| | | | |
| | | | \------------------------ maker-scaffold02855-augustus-gene-0.11-mRNA-1/245-288 (75)
| | | |
| | | \------------------------------------------------- maker-scaffold02169-augustus-gene-0.32-mRNA-1/581-618 (49)
| | |
\--72-+ \------------------------------------------------------- maker-scaffold01323-snap-gene-0.39-mRNA-1/317-339 (18)
|
|------------------------------------------------------------- maker-scaffold00019-augustus-gene-1.39-mRNA-1/411-443 (10)
|
| /------ maker-scaffold02360-snap-gene-0.37-mRNA-1/47-94 (37)
|--------------------------68--------------------------+
| \------ maker-scaffold04780-augustus-gene-0.27-mRNA-1/183-221 (39)
|
\------------------------------------------------------------- maker-scaffold04418-augustus-gene-0.7-mRNA-1/364-401 (92)
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