PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 0200010569
Common NameOT_ostta02g03300
Organism
Ostreococcus tauri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Family MYB_related
Protein Properties Length: 735aa    MW: 81784.7 Da    PI: 7.5149
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
0200010569genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.29.2e-0990127338
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlk 38 
                      +WT+e d +l+ av+++G + W  I ++m+    g t k
       0200010569  90 SWTPEQDAKLLAAVTEHGEK-WQHITSMMQqvrPGCTKK 127
                      6*******************.********9666555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500904.1824587IPR017877Myb-like domain
SuperFamilySSF466892.84E-580118IPR009057Homeodomain-like
SMARTSM007170.003487139IPR001005SANT/Myb domain
PROSITE profilePS500906.71388137IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.5E-689138IPR009057Homeodomain-like
PfamPF002495.8E-690132IPR001005SANT/Myb domain
CDDcd001670.0013790137No hitNo description
SuperFamilySSF511973.85E-14184324No hitNo description
PfamPF057212.0E-7184321IPR008775Phytanoyl-CoA dioxygenase
Gene3DG3DSA:2.60.120.6209.6E-11184322No hitNo description
SuperFamilySSF534483.75E-37368578IPR029044Nucleotide-diphospho-sugar transferases
Gene3DG3DSA:3.90.550.107.8E-42379627IPR029044Nucleotide-diphospho-sugar transferases
PfamPF005352.1E-22382557IPR001173Glycosyltransferase 2-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0016740Molecular Functiontransferase activity
Sequence ? help Back to Top
Protein Sequence    Length: 735 aa     Download sequence    Send to blast
MEKNSCEKAV RCAREARAAI ARAEQSEKRR RTSDESGRCT PAPARWTEGD SARAKELRES  60
GLEWDFIAKM LSTSELTWSA KQCEESFQAS WTPEQDAKLL AAVTEHGEKW QHITSMMQQV  120
RPGCTKKQSR GRAMMLLDER SANVIHEERE YKANAAAEEA GKTLQVDPAK SWHPVNRRRM  180
LNRGWHLDIG AGFSPDAVRT PEGHPFQGAI ILIFLSDCEP GGGGTAFIKG SHKWVAQHVR  240
TKGGIVHSDL NSWAIELVSE LSSAGRLPLS YEIDANEAEN AMSRHDIDGV IEQLVGKAGT  300
VALLHPWLIH SGTSNLSSQV RYLANGMARV KEESFKEQGI PTIKEVASDQ PKYSRTLDFM  360
PSTEPDEQVV RPPVDETLPR VSIIVPVHNA ARFLDETLSS VCAQTYRGPV EVSIFDDGST  420
DESAKFIRRW REALERVGIS VVVNGSRWPE SAQFVAEDAP NCGIGFCRNR CIQQSSGSIL  480
VFLDADDVMM PNRLEVQVPL AMNNPRAIIG GCWKRYPSGS TEHYEAWANM MTQKELHLEQ  540
FRECTVLLPT WCMTRANFDE IGGFVEAPPV ALRAKRTGQV PSMLRAGDYP HNPVLLYRWS  600
PQSASARCSI RRLLQVRAQA FEERILSLPT WEKFIVWGAG RDAKNFLNEI SPSARQRVQA  660
LIDVDPRKTG RKYTNTNVGD EVSVPIVHFA KAPRGLPVVV CVAKRRKGSG VSGDLESNVD  720
TLGLIEGTTL WYFN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022840794.10.0Glycosyl transferase, family 2
TrEMBLA0A090N4Q20.0A0A090N4Q2_OSTTA; Glycosyl transferase, family 2
STRINGA0A090N4Q20.0(Ostreococcus tauri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP721922
Publications ? help Back to Top
  1. Derelle E, et al.
    Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features.
    Proc. Natl. Acad. Sci. U.S.A., 2006. 103(31): p. 11647-52
    [PMID:16868079]