PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

0300010272

Common Name

OT_ostta03g02740

Organism

Ostreococcus tauri

Taxonomic ID

70448

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus

Family

bZIP

Protein Properties

Length: 520aa MW: 56835.8 Da PI: 5.0183

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
0300010272	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.8	4.7e-13	156	215	2	61
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 e +r +r+ +NRe+A+ sR+RKk+++ Le+++ +Le++N++L+ + +l++e +l+ 0300010272 156 TEEERRKRLDRNRESAQNSRARKKEYVSDLEKRARALEQQNMELQTMVINLTNENHALRV 215 567899************************************************999876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	9.0E-14	155	219	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.829	157	220	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.4E-10	159	215	IPR004827	Basic-leucine zipper domain
CDD	cd14704	6.77E-22	160	211	No hit	No description
SuperFamily	SSF57959	1.75E-10	160	215	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.3E-15	160	218	No hit	No description
PROSITE pattern	PS00036	0	162	177	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence Send to blast
MLASARTTPE MKKKTRDRER AVVSEDERNS KIFFDELPTP STSEARAEAS EKPVGWTSGS 60 DCTDTPWEDG ESAAAVEVAA MDSFLENLVD LPVDGLVGDA GFLEDCFGAL SGEERSQQEL 120 SACGLVKNGE RWEDGASSSR ATASGKDVTP TALGETEEER RKRLDRNRES AQNSRARKKE 180 YVSDLEKRAR ALEQQNMELQ TMVINLTNEN HALRVNLQSA GYSVPAMMVP CVYQTMTPKI 240 PLPPMNVQDT ELTDPPSPVP LEKKPAKRRR QTVVASATAA MLGVMSVVGL VSRDAAPTNR 300 VPEHSVSRRL LALSGSPVEE HLVKVGINVT SLREEMVKND DERSFALPDS TSSGEVSLWG 360 DITSDGRVVN VLKPTDAKDP WFSAFNAAGM QNHVNLLSRV SCTELFKFTG ANEGGVVAAR 420 EAETSAWKDE ESRQKMERKK YTGAIPMLSG KENSTSFSDG GHEEIDGNSL VSVLLPPPIE 480 GVMQQLSKLF VVTYNKRTAD YTTHSCLMPQ PMTTAHRHM*

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence Send to blast

MLASARTTPE MKKKTRDRER AVVSEDERNS KIFFDELPTP STSEARAEAS EKPVGWTSGS  60
DCTDTPWEDG ESAAAVEVAA MDSFLENLVD LPVDGLVGDA GFLEDCFGAL SGEERSQQEL  120
SACGLVKNGE RWEDGASSSR ATASGKDVTP TALGETEEER RKRLDRNRES AQNSRARKKE  180
YVSDLEKRAR ALEQQNMELQ TMVINLTNEN HALRVNLQSA GYSVPAMMVP CVYQTMTPKI  240
PLPPMNVQDT ELTDPPSPVP LEKKPAKRRR QTVVASATAA MLGVMSVVGL VSRDAAPTNR  300
VPEHSVSRRL LALSGSPVEE HLVKVGINVT SLREEMVKND DERSFALPDS TSSGEVSLWG  360
DITSDGRVVN VLKPTDAKDP WFSAFNAAGM QNHVNLLSRV SCTELFKFTG ANEGGVVAAR  420
EAETSAWKDE ESRQKMERKK YTGAIPMLSG KENSTSFSDG GHEEIDGNSL VSVLLPPPIE  480
GVMQQLSKLF VVTYNKRTAD YTTHSCLMPQ PMTTAHRHM*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003078183.2	0.0	Basic-leucine zipper domain
TrEMBL	A0A090M4T0	0.0	A0A090M4T0_OSTTA; Basic-leucine zipper domain
STRING	A0A090M4T0	0.0	(Ostreococcus tauri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP5392	8	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56660.1	2e-15	basic region/leucine zipper motif protein 49

Publications ? help Back to Top
Derelle E, et al. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Proc. Natl. Acad. Sci. U.S.A., 2006. 103(31): p. 11647-52 [PMID:16868079]