PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

1500010105

Common Name

OT_ostta15g01060

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus

Family

Protein Properties

Length: 194aa MW: 21430.8 Da PI: 11.8498

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
1500010105	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.3	1.9e-09	137	189	1	53
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 ek l+++ r+ +NRe+A rsR++++ + Le++ ++L++e ++Lk++l +++ 1500010105 137 EKTLRAQERLFRNRESAARSREKRLGALRALEDENAQLKGELTRLKNKLAKYE 189 7999******************************************9998877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.1E-7	131	190	No hit	No description
PROSITE profile	PS50217	8.634	139	190	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.69E-7	141	190	No hit	No description
Pfam	PF07716	9.6E-5	143	190	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	145	159	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence Send to blast
MLSLPSLSTM SFRELTAALA EEGEKASEAT TRGRRAATKK TKTTTKTKTS ATISATTAVK 60 RSRNGVVKTR ATPEAKMGRR TRMKIDTVAV PTVPGVSYAP MKLKRRSNIP TPAIRRALAP 120 KKMGRRPKDA PEETAEEKTL RAQERLFRNR ESAARSREKR LGALRALEDE NAQLKGELTR 180 LKNKLAKYER ANP*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003083249.2	1e-130	Basic-leucine zipper domain
TrEMBL	A0A096P9W4	1e-129	A0A096P9W4_OSTTA; Basic-leucine zipper domain
STRING	A0A096P9W4	1e-129	(Ostreococcus tauri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP7025	3	3

Publications ? help Back to Top
Derelle E, et al. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Proc. Natl. Acad. Sci. U.S.A., 2006. 103(31): p. 11647-52 [PMID:16868079]