PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

1500010145

Common Name

Ot15g01450, OT_ostta15g01440

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus

Family

Protein Properties

Length: 268aa MW: 29290.1 Da PI: 11.9706

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
1500010145	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21	7.5e-07	10	62	3	55
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 + +r+rr++ NR A+ +sR+RK++ e +++v++Le+ +a++ e+ +l++ 1500010145 10 AARRARRLAANRAASAASRKRKREVELETRRRVDALESLVRAMAAENATLREA 62 579*********************99999999999999999999998888774 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.9E-4	8	72	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.1E-6	9	65	No hit	No description
PROSITE pattern	PS00036	0	15	30	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence Send to blast
MDRGGDGADA ARRARRLAAN RAASAASRKR KREVELETRR RVDALESLVR AMAAENATLR 60 EALMTVACGG GVEGGWEARK VPLPRAARDA RARANENASS PASSSLTASW EEIGGDVGRL 120 ASSGEARSTD AFADEYTECA LRTKRSKLAR VARADEDAKT LEYERRRVGE GPLGATRVDE 180 PRAERGRARI HMLFANALSR RSTPSTTPRT TSPKISPTIS TRFSRMLASK TSLTSRMPPT 240 QIFRRSFRAS RSCRRAAKTR SVFKKRP*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003083289.1	0.0	Basic-leucine zipper domain
TrEMBL	A0A454XSJ1	0.0	A0A454XSJ1_OSTTA; Uncharacterized protein
TrEMBL	Q00V63	0.0	Q00V63_OSTTA; Basic-leucine zipper domain
STRING	Q00V63	0.0	(Ostreococcus tauri)

Link Out ? help Back to Top
Entrez Gene	9830869

Publications ? help Back to Top
Derelle E, et al. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Proc. Natl. Acad. Sci. U.S.A., 2006. 103(31): p. 11647-52 [PMID:16868079]