PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 231160
Common NameSELMODRAFT_231160, TGA2
Organism
Selaginella moellendorffii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
Family bZIP
Protein Properties Length: 298aa    MW: 33703.4 Da    PI: 10.0288
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
231160genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1322.8e-103474444
            XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44
             k+ rr+++NReAAr+sR+RKka++++Le    +L +  ++
  231160 34 AKALRRLAQNREAARKSRLRKKAYVQQLESSRMKLNQLEQE 74
            6999*************************876666655544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.001331104IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.2553377IPR004827Basic-leucine zipper domain
PfamPF001702.2E-73475IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-73578No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-73578No hitNo description
PROSITE patternPS0003603853IPR004827Basic-leucine zipper domain
PfamPF141441.7E-3497172IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
METNVIKSEQ NQQQAAGAAG SNHHHRREHK NLDAKALRRL AQNREAARKS RLRKKAYVQQ  60
LESSRMKLNQ LEQELQRARA AAFDMDYARW LEEQHRQLCE LRSALQSHVA DNELRVLVDN  120
GLAHYDEIFR MKSVAAKADV FHLVSGMWKS PAERCFMWMG GFRPSELLKI LIPQLEPLTE  180
QQLMGICNLQ QSSQQAEDAL SQGMEALQQS LSDTLASGSL GASSNVANYM GQMAMAMGKL  240
GTLENFVRQA DNLRQQTLQQ MHRILTTRQA ARGLLAMGDY FARLRALSSL WSARPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024529114.10.0transcription factor TGA2.3
RefseqXP_024536795.10.0transcription factor TGA2.3 isoform X1
RefseqXP_024536796.10.0transcription factor TGA2.3 isoform X2
SwissprotQ6IVC21e-147TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLD8RBH70.0D8RBH7_SELML; Uncharacterized protein TGA2
STRINGEFJ307970.0(Selaginella moellendorffii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7221667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-139bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Banks JA, et al.
    The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
    Science, 2011. 332(6032): p. 960-3
    [PMID:21551031]
  3. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]