PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 27099
Organism
Ostreococcus lucimarinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Family bZIP
Protein Properties Length: 149aa    MW: 16396.7 Da    PI: 9.2402
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
27099genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1271e-0878136563
             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
             kr++r   NR++A rs +RK  +++ Le+k  eLe+  ++L+ e e++   va+l +e+
   27099  78 KRAKRILANRLSAARSKERKTRYVKGLEKKLNELEECERTLILERERMATAVATLAAEN 136
             9****************************************************999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.6E-974138IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.2276139IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.61E-878132No hitNo description
PfamPF001701.2E-678136IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.8E-878133No hitNo description
CDDcd147032.01E-1279130No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MTPTPGKHRR SLSTPVDVLA SSALQRALDR ARDRHGGDDA PSRSDSLFGD EDAMAHAMAI  60
DLDDAPLDVR ELAMQDPKRA KRILANRLSA ARSKERKTRY VKGLEKKLNE LEECERTLIL  120
ERERMATAVA TLAAENSALQ MMMGTPAR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0005930.0CP000593.1 Ostreococcus lucimarinus CCE9901 chromosome 13, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001420935.11e-102predicted protein
TrEMBLA4S6F61e-100A4S6F6_OSTLU; Uncharacterized protein
STRINGABO992281e-101(Ostreococcus 'lucimarinus')
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP678544
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31370.55e-12bZIP family protein