PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

29820.m001005

Common Name

RCOM_0847870

Organism

Ricinus communis

Taxonomic ID

3988

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus

Family

BES1

Protein Properties

Length: 98aa MW: 11169.7 Da PI: 11.5089

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
29820.m001005	genome	JCVI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	104.8	1.6e-32	34	92	3	61
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwv 61 + r pt +Er nnk+RERrRRa+a ki+aGLR++Gn+klpk+aD n+VlkALc + G+ 29820.m001005 34 KCRYPTDRERQNNKQRERRRRAVARKIFAGLRQHGNFKLPKHADSNDVLKALCXAGGYF 92 6799****************************************************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.6E-27	34	91	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 98 aa Download sequence Send to blast
MGDERKKAMK GCIKSSRGPW IVHRATKDGG IVTKCRYPTD RERQNNKQRE RRRRAVARKI 60 FAGLRQHGNF KLPKHADSND VLKALCXAGG YFKNAKLG

Cis-element ? help Back to Top
Source	Link
PlantRegMap	29820.m001005

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025014455.1	4e-60	LOW QUALITY PROTEIN: BES1/BZR1 homolog protein 1
Swissprot	Q9S7F3	5e-11	BEH1_ARATH; BES1/BZR1 homolog protein 1
TrEMBL	B9SL08	3e-65	B9SL08_RICCO; Uncharacterized protein
STRING	XP_002526677.1	4e-66	(Ricinus communis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF15152	11	13

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18890.1	4e-11	BES1/BZR1 homolog 3

Link Out ? help Back to Top
Phytozome	29820.m001005