PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 30170.m014268
Common NameRCOM_1598850
Organism
Ricinus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
Family bZIP
Protein Properties Length: 189aa    MW: 21494.2 Da    PI: 10.3848
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
30170.m014268genomeJCVIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.48.4e-10153178328
                    XXCHHHCHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   3 elkrerrkqkNReAArrsRqRKkaei 28 
                    +++r +r++kNRe+A rsR+RK++++
  30170.m014268 153 SDRRHKRMIKNRESAARSRARKQESL 178
                    799********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001704.2E-7153178IPR004827Basic-leucine zipper domain
CDDcd147074.99E-13155176No hitNo description
SuperFamilySSF579591.37E-5155181No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-6155177No hitNo description
PROSITE patternPS000360158173IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MEEVWKDVNL TCLQDRPSTT PRNTNNHPAF PCMILQDSLA RPFEKDPPTP PITHVSFSAR  60
AIDRDRFLNS SRPRPATMLG LNNSSRSDSH YIGNSAPIST RPNHHSHSHS RIETPTPFGS  120
SLISPFDVLG SSSLLLPPNI NKKWPQENHD NSSDRRHKRM IKNRESAARS RARKQESLYP  180
LYPCLFLSF
Cis-element ? help Back to Top
SourceLink
PlantRegMap30170.m014268
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015574357.11e-125protein FD
RefseqXP_015574359.11e-125protein FD
RefseqXP_015574361.11e-125protein FD
TrEMBLB9R8D71e-135B9R8D7_RICCO; Protein FD, putative
STRINGXP_002510580.11e-136(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37553252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.12e-20bZIP family protein