PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 30638
Organism
Ostreococcus lucimarinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Family bZIP
Protein Properties Length: 115aa    MW: 12858.6 Da    PI: 11.5406
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
30638genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.72.6e-1349103458
             XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
             +k+  rkq+NR +ArrsR+RK+ae+ e   kv eLe e  aL++e+++lkk  a+
   30638  49 RKKLARKQSNRDSARRSRLRKQAETVEINVKVSELEREVVALREENQRLKKRLAE 103
             79999**********************************************8775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.5E-1044102No hitNo description
SMARTSM003384.8E-644110IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.11748103IPR004827Basic-leucine zipper domain
PfamPF001703.9E-1149102IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.87E-750100No hitNo description
CDDcd147021.89E-951102No hitNo description
PROSITE patternPS0003605468IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009637Biological Processresponse to blue light
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    Send to blast
MLQNMTQTNP FWAAQAMLHR GIAMGQSAAL PQAGATTNGA SAATDELTRK KLARKQSNRD  60
SARRSRLRKQ AETVEINVKV SELEREVVAL REENQRLKKR LAENEGQRER KTTK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16268RRSRLRK
26269RRSRLRKQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0005830.0CP000583.1 Ostreococcus lucimarinus CCE9901 chromosome 3, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001416680.12e-76predicted protein
TrEMBLA4RUJ04e-75A4RUJ0_OSTLU; Uncharacterized protein
STRINGABO949737e-76(Ostreococcus 'lucimarinus')
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP4426911
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01120.14e-08G-box binding factor 2