PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 32832
Organism
Ostreococcus lucimarinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Family bZIP
Protein Properties Length: 246aa    MW: 26974.7 Da    PI: 5.1449
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
32832genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44.1e-10107167363
             XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
             e krerr+q NR++A +sR +K  ++ eLe+ ++e  +   aL  e+e l+ e+++l++ +
   32832 107 EEKRERRMQANRLSAAKSRMKKMRRMVELEQTCEETLTRVNALSAEVEALRAEYEELRARN 167
             78*****************************998766666689999999999999888766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.8E-14104174No hitNo description
SMARTSM003384.6E-13105169IPR004827Basic-leucine zipper domain
PfamPF001704.5E-8106167IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.921107170IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-9109164No hitNo description
CDDcd147037.38E-12110159No hitNo description
PROSITE patternPS000360112127IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MSEISPLASP RAEANGEREW GAPRHERSLS ESLESAQTSA WAREAGRGGS DKGRETSARQ  60
GLPPTVIGAP AHHARARSYS QADAHEPSLR TVLEEPRGAN GGTTTEEEKR ERRMQANRLS  120
AAKSRMKKMR RMVELEQTCE ETLTRVNALS AEVEALRAEY EELRARNEEL TSTLSTPRGP  180
HLDSASKEFL QSLSGVDGSF TGMTIDAKGY DDEAFAETLN IARASSMERL FDSDGFFVSS  240
PRMDE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0005870.0CP000587.1 Ostreococcus lucimarinus CCE9901 chromosome 7, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001419023.11e-177predicted protein
TrEMBLA4S0R01e-176A4S0R0_OSTLU; Uncharacterized protein
STRINGABO973161e-176(Ostreococcus 'lucimarinus')
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1224033