PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 448939
Common NameSELMODRAFT_448939
Organism
Selaginella moellendorffii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
Family EIL
Protein Properties Length: 574aa    MW: 65333.8 Da    PI: 10.4376
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
448939genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3267.55.8e-8242681254
             XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX.......................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
    EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksn.......................ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipek 80 
             +el+kr w d+ +lkr+k+++k +++++ ++   + sn                       + +eqa r+km raQDgiLkY lk+mevc+aqGfvYgiipek
  448939   4 DELEKRIWNDRLRLKRIKDKQKARVNNAFSS---NHSNhshgqqqqqqhhggpaaqhqnlgNLQEQA-RRKMLRAQDGILKYTLKMMEVCKAQGFVYGIIPEK 102
             79********************998655554...2222334666677899****************9.778******************************** PP

             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHH..HHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHH CS
    EIN3  81 gkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtl..gSLLsalmqhcdppqrrfplekgvepPWWPtGkelww 181
             gkpv+gas++ r      v +   gp +         +  +++ lq+ r++    l   +D+t   g+     mqhcdppqrr+plekgv+pPWWP+G+e+ww
  448939 103 GKPVSGASNNNR------VMEGE-GPLRSERPRRHGQV--RGHLLQI-RRRRWPALRRRPDATHfpGAPGHHAMQHCDPPQRRYPLEKGVAPPWWPSGDEEWW 195
             ************......99988.**996666666666..5688899.999999*********844699999******************************* PP

             HHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTT CS
    EIN3 182 gelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqee 254
             +elgl+k qg+ppykkphdlkk+wkv+v tavi+hmsp+i +ir+l+rqsk+lqdkm+akes +++s    e+
  448939 196 PELGLPKGQGPPPYKKPHDLKKVWKVGVVTAVIRHMSPDIGKIRKLVRQSKCLQDKMTAKESGTWISEEVGEQ 268
             *****************************************************************99754444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.6E-304114No hitNo description
SuperFamilySSF1167684.32E-49165269IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048733.0E-50166262No hitNo description
Gene3DG3DSA:1.10.3180.101.5E-55166268IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF051164.6E-6291332IPR006380Sucrose-phosphatase, N-terminal
PfamPF084725.5E-18372436IPR013679Sucrose-phosphatase, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005986Biological Processsucrose biosynthetic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016311Biological Processdephosphorylation
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0050307Molecular Functionsucrose-phosphate phosphatase activity
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    Send to blast
MDVDELEKRI WNDRLRLKRI KDKQKARVNN AFSSNHSNHS HGQQQQQQHH GGPAAQHQNL  60
GNLQEQARRK MLRAQDGILK YTLKMMEVCK AQGFVYGIIP EKGKPVSGAS NNNRVMEGEG  120
PLRSERPRRH GQVRGHLLQI RRRRWPALRR RPDATHFPGA PGHHAMQHCD PPQRRYPLEK  180
GVAPPWWPSG DEEWWPELGL PKGQGPPPYK KPHDLKKVWK VGVVTAVIRH MSPDIGKIRK  240
LVRQSKCLQD KMTAKESGTW ISEEVGEQAQ RPHKVSFKLK KAEAVEEIDR VGNAFEDLTQ  300
WYLDNAKDNP KIFRGTERCA SGISQAIREF KFDPCVSPRD ADLLSQLTAG DTEGLIGRGV  360
VLLCEMAPDS TLGLEDDLRR SVEILRPLHG IYRGKNFCMW VDRIRATKVG DVTWVVKFDK  420
WQRTDEELNY RLTTAVCFNM RMACLMRVHY ESTKRGLMEA QPTIGEKISR DESSSSGIQI  480
PGLLRLIYGE GKRGVTSGSK ARIKHTQVGT TGIKLISSNG EQMEGEKTRR VGVHVVNKTM  540
RINVKNPQTE SGKEKEKYNR ATKKVEHCEW KIS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-5516626222118Protein ETHYLENE INSENSITIVE 3
4zds_B5e-5516626222118Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1581810.0Selaginella moellendorffii clone JGIASXY-5D1, complete sequence
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD8TBG10.0D8TBG1_SELML; Uncharacterized protein
STRINGEFJ059860.0(Selaginella moellendorffii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5631682
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.13e-74ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Banks JA, et al.
    The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
    Science, 2011. 332(6032): p. 960-3
    [PMID:21551031]