PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462848791
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 219aa    MW: 24971.2 Da    PI: 9.5496
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462848791genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.51.2e-1196137351
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                 +GV++  k+ +W A I++      +k+++lg+ gt +eAa+++++a+ 
  462848791  96 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQDEAARLYDRAAF 137
                79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.96671150IPR001471AP2/ERF domain
SMARTSM003801.3E-495152IPR001471AP2/ERF domain
PfamPF008476.8E-695138IPR001471AP2/ERF domain
SuperFamilySSF541715.43E-895140IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.3E-698142IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MVSLRRRRLL GLCSGKDSLP VDLPKPIETV EPVHANVKPF SVHPLPSTKF SDVLVESPND  60
TDSLKEERTQ YYPGKEIKRR KRHRRKQYVD QEPCIMRGVY FKNMKWQAAI KVDKKQIHLG  120
TVGTQDEAAR LYDRAAFMCG REPNFELSEE EKRELQMYSW EDFLAVTRNT ITSKKQRKVG  180
SLRRSKADLF MGQSDGDTEM VNGGGSSNSD NGDAENSAS
Cis-element ? help Back to Top
SourceLink
PlantRegMap462848791
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001151501.11e-135uncharacterized protein LOC100285135
TrEMBLC0P9B01e-133C0P9B0_MAIZE; Ethylene-responsive transcription factor-like protein
STRINGPavir.Aa01947.1.p1e-128(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75163545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.22e-47ERF family protein