PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462851070
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family WRKY
Protein Properties Length: 102aa    MW: 11208.3 Da    PI: 8.4688
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462851070genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY58.71.1e-183375244
               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSS CS
       WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaed 44
               +Dgy+W+KYGqK +k+ + +rsY+rC +++C +kkkve   +d
  462851070 33 EDGYEWKKYGQKFIKNIQKTRSYFRCRHKRCGAKKKVEWHPSD 75
               7*************************************98877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-192176IPR003657WRKY domain
PROSITE profilePS5081115.8472775IPR003657WRKY domain
SuperFamilySSF1182906.67E-182876IPR003657WRKY domain
SMARTSM007746.0E-143289IPR003657WRKY domain
PfamPF031061.1E-163375IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    Send to blast
MASTSHPAPK CEGEESTETA AETSNGSQIV MPEDGYEWKK YGQKFIKNIQ KTRSYFRCRH  60
KRCGAKKKVE WHPSDADGDG GGTANQYELG AQYFGGGGAR SQ
Cis-element ? help Back to Top
SourceLink
PlantRegMap462851070
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9706331e-52EU970633.1 Zea mays clone 348246 hypothetical protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004986337.29e-38probable WRKY transcription factor 71
TrEMBLA0A368SIG92e-36A0A368SIG9_SETIT; Uncharacterized protein
STRINGBRADI1G13207.11e-33(Brachypodium distachyon)
STRINGSi038001m1e-33(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP101583444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.14e-12WRKY DNA-binding protein 13