PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462851136
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family MYB_related
Protein Properties Length: 161aa    MW: 18222 Da    PI: 4.5545
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462851136genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding331.4e-106302147
                     TT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 21 ggtWktIartmgkgRtlkqcksrwqky 47
                     ++ W++Ia++++ gRt++++k++w+++
        462851136  6 NR-WSKIAAKLP-GRTDNEIKNHWNTH 30
                     45.*********.************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.632135IPR017930Myb domain
CDDcd001672.78E-8531No hitNo description
Gene3DG3DSA:1.10.10.601.3E-14648IPR009057Homeodomain-like
PfamPF002493.1E-8630IPR001005SANT/Myb domain
SuperFamilySSF466897.8E-10640IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MAISENRWSK IAAKLPGRTD NEIKNHWNTH IKKKLIKMGI DPATHQPLAN SNAATSQSTN  60
TIESAKSSYS GDVQSLKECR QETMQIPTYS YEQSSQPEQS SNNCSHDLDQ MVNWRLESDL  120
PIDEPWPNFT SSSHDELGIV ADQLPWGGPT DWLLDYQDFD I
Cis-element ? help Back to Top
SourceLink
PlantRegMap462851136
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0684104e-56BT068410.1 Zea mays full-length cDNA clone ZM_BFb0166A10 mRNA, complete cds.
GenBankKJ7276454e-56KJ727645.1 Zea mays clone pUT5572 MYB transcription factor (MYB167) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820510.17e-68protein ODORANT1-like
RefseqXP_025820511.17e-68protein ODORANT1-like
RefseqXP_025820512.17e-68protein ODORANT1-like
RefseqXP_025820514.17e-68protein ODORANT1-like
RefseqXP_025820515.17e-68protein ODORANT1-like
RefseqXP_025820516.17e-68protein ODORANT1-like
RefseqXP_025820517.17e-68protein ODORANT1-like
RefseqXP_025820518.17e-68protein ODORANT1-like
RefseqXP_025820519.17e-68protein ODORANT1-like
RefseqXP_025820520.17e-68protein ODORANT1-like
RefseqXP_025820521.17e-68protein ODORANT1-like
RefseqXP_025820522.17e-68protein ODORANT1-like
RefseqXP_025820523.17e-68protein ODORANT1-like
TrEMBLA0A3L6PP212e-68A0A3L6PP21_PANMI; Protein ODORANT1-like
STRINGPavir.Fb02321.1.p8e-67(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7938563
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12350.12e-23myb domain protein 42