PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462852218
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family MYB_related
Protein Properties Length: 314aa    MW: 34489.1 Da    PI: 7.6718
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462852218genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.32.7e-11266312447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                      W   E+e l ++v+q+G+g+Wk I +  +    gRt+ ++k++w++ 
        462852218 266 WCVLEEETLRKGVEQYGSGNWKDILANNPdvfIGRTPVDLKDKWRNM 312
                      66669****************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-13256314IPR009057Homeodomain-like
PROSITE profilePS5129416.753258314IPR017930Myb domain
SuperFamilySSF466891.4E-14260313IPR009057Homeodomain-like
SMARTSM007170.0013262314IPR001005SANT/Myb domain
CDDcd116603.14E-19264314No hitNo description
PfamPF002492.1E-9265312IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0009901Biological Processanther dehiscence
GO:0010152Biological Processpollen maturation
GO:0043067Biological Processregulation of programmed cell death
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MPRLTPADAT LILDHVLGDP SVPADAAHAL LAALPFPSHP TPRLRRGVLL RRLAADPIVL  60
TSLFGHRAAV EERVREEAAE RVVGDGALET WRAADETAGA KYRMLAGQEK AHEILSKLDE  120
ASSHVNPIST PEVRKVVDAL ETSCADLHRS VEDPLPAAKA AADEVLAARM DKADNLNSAD  180
LSGRQTTCGT AGPSALNGKD KGPAKGTPSL MDWNPTAKTF EWDESPDPED SRPQFRRPHL  240
ASPRRMPVSP LQPPENKNKR RKARKWCVLE EETLRKGVEQ YGSGNWKDIL ANNPDVFIGR  300
TPVDLKDKWR NMMR
Cis-element ? help Back to Top
SourceLink
PlantRegMap462852218
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025811007.11e-127uncharacterized protein LOC112888859
TrEMBLA0A2T7E2541e-128A0A2T7E254_9POAL; Uncharacterized protein
STRINGOPUNC06G05020.11e-123(Oryza punctata)
STRINGSb02g020870.11e-122(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31543040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58340.23e-12MYB_related family protein