PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462852683
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 386aa    MW: 43722.9 Da    PI: 10.255
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462852683genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.92.9e-10167206541
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                k+ rr+++NReAAr+sR++Kka++e+Le+   k ++Le+e
  462852683 167 KALRRLAQNREAARKSRLKKKAYVEQLETsrlKLAQLEKE 206
                778*************************833344444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.4E-8161211No hitNo description
SMARTSM003381.5E-8161226IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.634165209IPR004827Basic-leucine zipper domain
PfamPF001702.1E-7167206IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.31E-6167209No hitNo description
PROSITE patternPS000360170185IPR004827Basic-leucine zipper domain
PfamPF141449.8E-28250322IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MAPPRPVGRY FTAGSAGRLP PGMGASRVMW MGADRRGARR NGQYRVRVAS VALCHGVISG  60
RVEGGRRRIG EETRLLFDLL KLTRHLKLEF SQKHRKGEHN QTWEFRALLN CNIGNWEEYN  120
MAYASPGTDT STDPDADEKN QMFELGHLTA NEAFDSGGKS KDELGPKALR RLAQNREAAR  180
KSRLKKKAYV EQLETSRLKL AQLEKELQRA RQQGIFISTP RNQLHSTCEN GTLAFETEHA  240
RWLEEHNKLI NELRAAVSTH AGDGDLRRIV DSIMAHYCES FRLRGAAARV DAFHVLSGMW  300
KTPVERCFLW LGGFRSSELL EMEAAMAKLG TLENFLQEAD NLRLQTLQQM QCILTTRQSA  360
RALLAISDYF SRLRALSSLW IARPQA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462852683
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020405654.11e-121uncharacterized protein LOC542756 isoform X2
SwissprotQ415588e-99HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0D2SPW61e-123A0A0D2SPW6_GOSRA; Uncharacterized protein
STRINGPavir.J05186.1.p1e-106(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2554523
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.25e-94TGACG motif-binding factor 6