PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462853180

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

NAC

Protein Properties

Length: 138aa MW: 15975.2 Da PI: 10.0712

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462853180	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	101.1	1.6e-31	16	93	52	128
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +ekewyf+++rdkky+++ r+nr+t +g+Wkatg+d++++s+ +++ +glkk+Lvfykgra kg ktdW+mheyrl 462853180 16 SIGEKEWYFYCPRDKKYRNSGRPNRVTGAGFWKATGTDRPIYSSeGTKCIGLKKSLVFYKGRAAKGIKTDWMMHEYRL 93 34789************************************956667*************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	33.352	1	117	IPR003441	NAC domain
SuperFamily	SSF101941	1.96E-32	16	96	IPR003441	NAC domain
Pfam	PF02365	2.2E-14	20	93	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 138 aa Download sequence Send to blast
MPLRYWNFCV NRELASIGEK EWYFYCPRDK KYRNSGRPNR VTGAGFWKAT GTDRPIYSSE 60 GTKCIGLKKS LVFYKGRAAK GIKTDWMMHE YRLLSLIDPT LPKKTRDKNI AAEAQQHQKL 120 NSQDGSSSYP DIIEDSRT

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-31	15	94	66	143	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-31	15	94	66	143	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-31	15	94	66	143	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-31	15	94	66	143	NO APICAL MERISTEM PROTEIN
3swm_A	2e-31	15	94	69	146	NAC domain-containing protein 19
3swm_B	2e-31	15	94	69	146	NAC domain-containing protein 19
3swm_C	2e-31	15	94	69	146	NAC domain-containing protein 19
3swm_D	2e-31	15	94	69	146	NAC domain-containing protein 19
3swp_A	2e-31	15	94	69	146	NAC domain-containing protein 19
3swp_B	2e-31	15	94	69	146	NAC domain-containing protein 19
3swp_C	2e-31	15	94	69	146	NAC domain-containing protein 19
3swp_D	2e-31	15	94	69	146	NAC domain-containing protein 19
4dul_A	2e-31	15	94	66	143	NAC domain-containing protein 19
4dul_B	2e-31	15	94	66	143	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462853180

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010937354.1	2e-57	putative NAC domain-containing protein 94
Refseq	XP_020184786.1	1e-57	protein FEZ-like
Swissprot	Q9FIW5	4e-49	NAC94_ARATH; Putative NAC domain-containing protein 94
TrEMBL	A0A453KYM9	8e-58	A0A453KYM9_AEGTS; Uncharacterized protein
TrEMBL	W1NG41	8e-57	W1NG41_AMBTC; Uncharacterized protein
STRING	ERM94456	1e-57	(Amborella trichopoda)
STRING	Traes_5AL_F35B9FF8E.1	1e-58	(Triticum aestivum)
STRING	Traes_5BL_38DFDFE41.1	1e-58	(Triticum aestivum)
STRING	Traes_5DL_0713E8429.2	1e-58	(Triticum aestivum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	2e-51	NAC domain containing protein 94