PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462856137
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 237aa    MW: 24734 Da    PI: 8.2422
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462856137genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.81.2e-123482253
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
               +ykGV+ ++  g+W + Irdp + g   + +lg+++t+eeAa a++ a++ l
  462856137 34 KYKGVTKRP-GGKWGSDIRDPASTG--WKMWLGTYDTPEEAACAYDTAARTL 82
               8********.9*********95543..999******************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.3E-223393IPR001471AP2/ERF domain
PfamPF008472.1E-53481IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-163492IPR016177DNA-binding domain
PROSITE profilePS5103217.6623491IPR001471AP2/ERF domain
CDDcd000181.06E-193493No hitNo description
SMARTSM003801.3E-213497IPR001471AP2/ERF domain
PRINTSPR003671.3E-63546IPR001471AP2/ERF domain
PRINTSPR003671.3E-65874IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MEGGIVGFAK KAAAAMAANV VPQEAHGGAP TTRKYKGVTK RPGGKWGSDI RDPASTGWKM  60
WLGTYDTPEE AACAYDTAAR TLQPGSMTNF PESAGEEEKR RAVVLTHVAR LNLHFPNATA  120
PPPAYFAPVF TSAPPAAFPS APAPNAPAVA MPQTQSFLDR CLNLLTTMSL ALSHLRLLHA  180
SMVASAMPTA EPFQTPLAAA APNPPAFQPF AAPDTYTAPQ PGASTHDWPA NSSAGSN
Cis-element ? help Back to Top
SourceLink
PlantRegMap462856137
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1971958
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-15ERF family protein