PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462856663
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 204aa    MW: 21489.9 Da    PI: 4.2303
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462856663genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.15.9e-152441055
        AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +++g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  462856663  2 RSWGSWVSEIRAP---NQKRRIWLGSYATPEAAARAYDAALLCLKG 44
               57**********9...336************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103218.294152IPR001471AP2/ERF domain
CDDcd000185.43E-15154No hitNo description
SMARTSM003801.2E-24158IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.0E-24152IPR001471AP2/ERF domain
PfamPF008479.1E-9244IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-15253IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MRSWGSWVSE IRAPNQKRRI WLGSYATPEA AARAYDAALL CLKGSAADLN FPVHLPFHIP  60
AAAMSPKSIQ RVAAAAAANA CSPLKDGGGG GDSYPGAAAG AINGAAPPYS YGTGDTSPAA  120
SYCSPETANT TDRYNCEAAR YDDVMMGDVD YGALADVEAF FQSPKCMEFG MMDPCSTFFA  180
PAPMAAEWEE EGGEIDLWSF SSLN
Cis-element ? help Back to Top
SourceLink
PlantRegMap462856663
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0835321e-102BT083532.1 Zea mays full-length cDNA clone ZM_BFb0008I08 mRNA, complete cds.
GenBankKJ7277351e-102KJ727735.1 Zea mays clone pUT5676 AP2-EREBP transcription factor (EREB13) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004954039.11e-78ethylene-responsive transcription factor ERF014
TrEMBLA0A368PRU63e-77A0A368PRU6_SETIT; Uncharacterized protein
TrEMBLK3Z2372e-77K3Z237_SETIT; Uncharacterized protein
STRINGSi020605m3e-78(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31973469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-21ERF family protein