PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462860323
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 145aa    MW: 15665.9 Da    PI: 8.5115
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462860323genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.71.4e-131048143
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAa 43
               ++y+GVr ++ +gr++AeIrdp +   r+r++lg+f++ae  a
  462860323 10 PRYRGVRKRP-WGRFAAEIRDPAK---RARVWLGTFDSAEADA 48
               68********.**********843...6**********77655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.8E-91046IPR001471AP2/ERF domain
CDDcd000181.82E-161049No hitNo description
PROSITE profilePS5103216.4361149IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-181149IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-111148IPR016177DNA-binding domain
SMARTSM003801.2E-131159IPR001471AP2/ERF domain
PRINTSPR003675.8E-91223IPR001471AP2/ERF domain
PRINTSPR003675.8E-93450IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MCDTAAVAAP RYRGVRKRPW GRFAAEIRDP AKRARVWLGT FDSAEADARX XXPPPAPAQA  60
PTPRRASAGR RPDLQLQLHR RRVALPRPAA VPDAGCHSDC ASSASVVDDG DDASTVRSRA  120
SFDLNLPAPV DGDDLDLCTE LRLCL
Cis-element ? help Back to Top
SourceLink
PlantRegMap462860323
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9580142e-60EU958014.1 Zea mays clone 1640422 ethylene-responsive transcription factor 3 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001148189.24e-42uncharacterized protein LOC100281797
TrEMBLA0A0A9P7I77e-45A0A0A9P7I7_ARUDO; Uncharacterized protein
STRINGPavir.Ga00187.1.p3e-43(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51232758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.12e-18ethylene response factor 7