PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462864485
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 171aa    MW: 17885.3 Da    PI: 12.1366
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462864485genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.61e-202171456
        AP2  4 kGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
               +GVr ++ +gr++AeIrd +++   r+r++lg+f+t+eeAa+a++aa++kl+g+
  462864485 21 RGVRKRP-WGRYAAEIRDpVRKA--RARVWLGTFDTPEEAARAYDAAARKLRGP 71
               9******.**********55332..5**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.7E-261984IPR001471AP2/ERF domain
PROSITE profilePS5103223.1431978IPR001471AP2/ERF domain
SuperFamilySSF541713.6E-192079IPR016177DNA-binding domain
PfamPF008471.2E-142070IPR001471AP2/ERF domain
PRINTSPR003674.9E-102031IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-262179IPR001471AP2/ERF domain
CDDcd000186.58E-142180No hitNo description
PRINTSPR003674.9E-104460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MAPRRSTSPA GSSGELAGRL RGVRKRPWGR YAAEIRDPVR KARARVWLGT FDTPEEAARA  60
YDAAARKLRG PGAATHYPDT TPTLVAQRNR AVGAVVIFTP VAGPEPRTAS GGGGRAAAVP  120
VLLPDGGRER RAGADPVLAA QGRRARAERA GFLQVLVLVD HGRRDAGGGP G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-2018781372Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMap462864485
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGPavir.Fb00952.1.p1e-28(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP144461025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.14e-20ERF domain protein 11