PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462864828
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family WRKY
Protein Properties Length: 71aa    MW: 7764.48 Da    PI: 5.821
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462864828genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY24.84.5e-083349218
               --SS-EEEEEEE--TT- CS
       WRKY  2 dDgynWrKYGqKevkgs 18
               +Dgy+W+KYGqK +k+ 
  462864828 33 EDGYEWKKYGQKFIKNI 49
               7*************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-72650IPR003657WRKY domain
PROSITE profilePS508118.5132771IPR003657WRKY domain
SuperFamilySSF1182909.94E-72849IPR003657WRKY domain
PfamPF031061.4E-53350IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    Send to blast
MASTSHPAPK SKGEESNEAA AEAGNGSQLV MPEDGYEWKK YGQKFIKNIQ KISVDDDSSG  60
RCNNFSRAVD R
Cis-element ? help Back to Top
SourceLink
PlantRegMap462864828
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010231847.15e-16probable WRKY transcription factor 2
STRINGBRADI1G13207.12e-15(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP101583444