PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462869322
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 376aa    MW: 40432.2 Da    PI: 8.5807
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462869322genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_165.59.5e-21238300163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+elkre+rkq+NRe+ArrsR+RK+ae+eeL++ v++L +eN +L++e+++l++ ++kl+ e+
  462869322 238 ERELKREKRKQSNRESARRSRLRKQAETEELATQVESLAQENASLRSEISRLSNSSEKLRLEN 300
                89*********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.8E-20189IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1703.0E-17234297No hitNo description
PfamPF001704.1E-19238300IPR004827Basic-leucine zipper domain
SMARTSM003387.2E-21238302IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.288240303IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-11241296No hitNo description
CDDcd147023.85E-23243290No hitNo description
PROSITE patternPS000360245260IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MAHDEAVAIQ KTGKTASPPK DQPAPYPYPD WSAYYGPGML PPTYYAPAIT PGHAPPYMWG  60
PQPYMPPPFG TPYAAMYPHS GAYPHTLVPM MSNPTGVEPA KSTNSKEKSF SKKLKEIDGT  120
AVSTGSGNSK RTMSCSEDYS AEGSSDVNDQ KVSKTPRKRT SDDGPEKNAA ANMEGVVASN  180
HTLGNTSILP HHCFPAPVIK PSATNVVNSR AMATTISPPG VILPAHTGVP TDLSVKDERE  240
LKREKRKQSN RESARRSRLR KQAETEELAT QVESLAQENA SLRSEISRLS NSSEKLRLEN  300
SALMVKLNDT AAPKPAEAEH SLDKAAASSS PEGPENFLSM INSTNTASVS QHTEHGEPKL  360
RQLFDSKPAT NVAAVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1254260RRSRLRK
2254261RRSRLRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMap462869322
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025807251.10.0common plant regulatory factor 1-like isoform X1
TrEMBLA0A0A9PLG00.0A0A0A9PLG0_ARUDO; GBF1
STRINGSb09g028990.10.0(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.13e-40G-box binding factor 3