PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462869947
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 128aa    MW: 14179.8 Da    PI: 8.6946
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462869947genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-191668156
        AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
               ++y+GVr+++ +g+++AeIrd      +++r++lg+f+taeeAa+a+++ +  ++g+
  462869947 16 TKYRGVRRRP-SGKFAAEIRDS---RrQSARVWLGTFDTAEEAARAYDREAYLMRGH 68
               69********.7*********3...2345*********************9999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.1E-141668IPR001471AP2/ERF domain
CDDcd000188.20E-281676No hitNo description
Gene3DG3DSA:3.30.730.102.8E-301777IPR001471AP2/ERF domain
PROSITE profilePS5103222.1151775IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-221777IPR016177DNA-binding domain
SMARTSM003801.5E-311781IPR001471AP2/ERF domain
PRINTSPR003672.7E-101829IPR001471AP2/ERF domain
PRINTSPR003672.7E-104157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MESCGCDQGK DIGEATKYRG VRRRPSGKFA AEIRDSRRQS ARVWLGTFDT AEEAARAYDR  60
EAYLMRGHLA VLNFPDEARN YVRGSSSSQR QQLGGGHGGN GGQPIELEYL DDKVLQDLLL  120
RGGDGKKM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-2991145114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462869947
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022683705.12e-52ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC54e-32ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A3L6RM423e-51A0A3L6RM42_PANMI; Uncharacterized protein
STRINGEMT069207e-50(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.17e-23Ethylene-responsive element binding factor 14
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]