PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462875793
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 137aa    MW: 14767.5 Da    PI: 10.8204
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462875793genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.81.5e-093371555
        AP2 15 WvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +v++    p     ++r++lg+f+t+e Aa a+++a+ + +g
  462875793  3 YVVR--NkP-----SARVWLGTFDTPEAAALAYDQAAFSARG 37
               5544..333.....59*********************99886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.327145IPR001471AP2/ERF domain
SMARTSM003801.5E-10251IPR001471AP2/ERF domain
PfamPF008475.1E-6837IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-11847IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.1E-16946IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MSYVVRNKPS ARVWLGTFDT PEAAALAYDQ AAFSARGDAA VLNFPVERVQ ESLDRSNGAR  60
RRPRLPSATL QAHPPAQANF PVDQRQQREL SNAAATAAGA APVLGRHVHR VLDNHGSTAA  120
ADDSARKLRH VGHVLQC
Cis-element ? help Back to Top
SourceLink
PlantRegMap462875793
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-17ethylene response factor 1