PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462876063
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family CPP
Protein Properties Length: 107aa    MW: 12381.1 Da    PI: 8.4397
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462876063genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR39.61e-121046541
        TCR  5 gCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41
               +C+C++ +C+++YC Cf ++ +Cs+ C+Ce C N+e+
  462876063 10 SCSCRNARCIQRYCHCFGNRWYCSDACRCEACWNTES 46
               7*********************************986 PP
2TCR29.51.5e-0985106122
        TCR   1 kekkgCnCkkskClkkYCeCfa 22 
                ++ kgC+C+ks+C k+YCeCf+
  462876063  85 RHVKGCTCRKSECRKNYCECFK 106
                589******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011146.3E-7647IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163421.7137107IPR005172CRC domain
PfamPF036382.1E-91045IPR005172CRC domain
PfamPF036389.0E-688106IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MGDDEGPRPS CSCRNARCIQ RYCHCFGNRW YCSDACRCEA CWNTESRAAF VEERAEIILK  60
NKPGAFQSKI ARDGDPSVPG KEQRRHVKGC TCRKSECRKN YCECFKW
Cis-element ? help Back to Top
SourceLink
PlantRegMap462876063
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004969151.12e-33protein tesmin/TSO1-like CXC 3 isoform X1
TrEMBLA0A368R9B53e-32A0A368R9B5_SETIT; Uncharacterized protein
TrEMBLK3XLU85e-32K3XLU8_SETIT; Uncharacterized protein
STRINGSi002871m8e-33(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP122672336
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04850.14e-17Tesmin/TSO1-like CXC domain-containing protein