PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462878900
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 427aa    MW: 46375.6 Da    PI: 9.0308
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462878900genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.61e-11132169539
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLe 39 
                k  rr+++NReAAr+sR+RKka+i++Le+   + ++Le
  462878900 132 KTLRRLAQNREAARKSRLRKKAYIQQLETgriRLAQLE 169
                7789***********************96333555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.6E-9128174No hitNo description
SMARTSM003382.2E-6128200IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.565130159IPR004827Basic-leucine zipper domain
PfamPF001703.9E-9132170IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.56E-7132162No hitNo description
PROSITE patternPS000360135150IPR004827Basic-leucine zipper domain
PfamPF141443.0E-24209283IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MAYPSTSGMI QASSSHHGGT MRRDPEGYDM PSDLDQAVLL YFDGHQAKPS IQEQPQTLNI  60
FPSQPMHVEP SPKGSMTSAA AAAQVAGSSK PVKAADGQFS AGKSSKPALK REGGGAAASS  120
SDQEGPRRPD PKTLRRLAQN REAARKSRLR KKAYIQQLET GRIRLAQLEQ EVQVARTQGA  180
LWGTGTLSPD AALFNLEYER WLGDHSKVIA RLRAAAEEHR PDGELRAYAD EAASHYGALM  240
AHKARLAVAD PLHLLSGLWK GAAERCLLWI GGFRPSEIIK VVLRHVEPLT EQQTAAACDV  300
QQSARRAEDA LDGELGALLQ SLSEVVSSDP HPPAMYGQQL YHPADVAGYM GHMHMAVAMD  360
KVAALGTYLR QADELRMQTL GALRQMLTAR QAARCFVAVD DYFCRLRTLS TLWTTGRQAQ  420
LARGPAG
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462878900
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0550420.0BT055042.1 Zea mays full-length cDNA clone ZM_BFc0123E11 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004965885.10.0transcription factor TGAL8 isoform X1
SwissprotQ69T210.0TGAL8_ORYSJ; Transcription factor TGAL8
TrEMBLK3XWV90.0K3XWV9_SETIT; Uncharacterized protein
STRINGSi006417m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129722126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-119bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]