PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462878998

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

G2-like

Protein Properties

Length: 422aa MW: 46204.1 Da PI: 8.8842

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462878998	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	71.1	1.7e-22	165	209	2	46
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehv 46 pr+rWt+ LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+h+ 462878998 165 PRMRWTTALHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHM 209 9*****************************************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.97E-8	162	208	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	6.4E-19	162	209	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.3E-14	165	208	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence Send to blast
MEERWKDGES KTVCVLSCYI NVLYLATEGS MLCSRGVADP MPENTPASID LWKLAMASTV 60 TAPDLSLHIS PPSPLDVRSS GEGDACLETG HNDEPNLCLG LDTATAMARQ DTVHSSLGDT 120 QQQRLHQPGQ IQRFKKSSSG SQTLSGGAMR SGNGSGGGKR SSRAPRMRWT TALHAHFVHA 180 VELLGGHERA TPKSVLELMN VKDLTLAHMY RTVKGTTADR SCAAGHVQMS DMGFLRRGCA 240 VYGFDAFNHS TSNATANTRK LSTAGMPGVQ EAPSWCLRPP YAQQTPLPLP CPYLMSSHHN 300 RYLLAQNQGW RRGRQQATAH CIDQDDTWRL HATGPLEMGR RSSWSAGVAD RWSSSSMVPY 360 PTMNARSSSG ADQARMKQQL SSRMPSLEIS LGRQGWQHNL QEQQQQQRSA TTTKELTLLK 420 CL

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence Send to blast

MEERWKDGES KTVCVLSCYI NVLYLATEGS MLCSRGVADP MPENTPASID LWKLAMASTV  60
TAPDLSLHIS PPSPLDVRSS GEGDACLETG HNDEPNLCLG LDTATAMARQ DTVHSSLGDT  120
QQQRLHQPGQ IQRFKKSSSG SQTLSGGAMR SGNGSGGGKR SSRAPRMRWT TALHAHFVHA  180
VELLGGHERA TPKSVLELMN VKDLTLAHMY RTVKGTTADR SCAAGHVQMS DMGFLRRGCA  240
VYGFDAFNHS TSNATANTRK LSTAGMPGVQ EAPSWCLRPP YAQQTPLPLP CPYLMSSHHN  300
RYLLAQNQGW RRGRQQATAH CIDQDDTWRL HATGPLEMGR RSSWSAGVAD RWSSSSMVPY  360
PTMNARSSSG ADQARMKQQL SSRMPSLEIS LGRQGWQHNL QEQQQQQRSA TTTKELTLLK  420
CL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462878998

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004982402.1	1e-134	uncharacterized protein LOC101779847
TrEMBL	A0A0A9GJU4	1e-168	A0A0A9GJU4_ARUDO; Uncharacterized protein
STRING	EMT25059	1e-111	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3742	31	68

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.2	4e-26	G2-like family protein