PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462880529
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family GATA
Protein Properties Length: 136aa    MW: 14552.8 Da    PI: 10.3393
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462880529genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.91e-165389135
       GATA  1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
               C+nCg+++  Tp +Rrgp g+++LCnaCGl+++ kg+
  462880529 53 CQNCGVSSrlTPAMRRGPAGPRSLCNACGLMWANKGT 89
               **********************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501148.7744791IPR000679Zinc finger, GATA-type
SMARTSM004015.3E-1047101IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.66E-105097No hitNo description
Gene3DG3DSA:3.30.50.101.2E-145191IPR013088Zinc finger, NHR/GATA-type
CDDcd002029.36E-125291No hitNo description
PROSITE patternPS0034405380IPR000679Zinc finger, GATA-type
PfamPF003201.6E-145389IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MLCTLHKLIS LVRMKRRKGQ FAGRVDFGDH ACSSAACSSP ANGENGHFRG TICQNCGVSS  60
RLTPAMRRGP AGPRSLCNAC GLMWANKGTL RSPMNAPTMT LQHPANPCKI SKMGDADDKN  120
SSVLPAEHKQ ATVRSD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250|UniProtKB:Q8LAU9}.
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250|UniProtKB:Q8LAU9}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462880529
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By abscisic acid (ABA), and drought and salt stresses. Down-regulated by jasmonate and wounding. {ECO:0000269|PubMed:19618278}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004981867.18e-69GATA transcription factor 19
SwissprotB8AR304e-59GAT19_ORYSI; GATA transcription factor 19
SwissprotQ0DNU14e-59GAT19_ORYSJ; GATA transcription factor 19
TrEMBLK4ACZ01e-66K4ACZ0_SETIT; Uncharacterized protein
STRINGSi036747m2e-67(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.18e-20ZIM-like 1