PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462882426
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family G2-like
Protein Properties Length: 164aa    MW: 18670.2 Da    PI: 11.8379
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462882426genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.33e-322376255
    G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
               prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+
  462882426 23 PRLRWTPDLHMAFVNAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 76
               8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.3361979IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.2E-291977IPR009057Homeodomain-like
SuperFamilySSF466891.34E-142277IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-232378IPR006447Myb domain, plants
PfamPF002491.4E-92475IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
SKAEGSGEQR VPSVRQYNRS KLPRLRWTPD LHMAFVNAVE RLGGQERATP KLVLQMMNVR  60
GLSIAHVKSH LQMYRSKKLD QDGRPRGSIS SVYSPMDFHF MRDGRFHGMS FLQRAAALSS  120
SGPEHGGFFA SRNGSRPEVS RLYGLLHHRQ PQMQSLDFRS SSFR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-202476456Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-202476456Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-202476355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-202476355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-202476355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-202476355Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-202476456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-202476456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-202476456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-202476456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-202476456Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-202476456Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462882426
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025824409.11e-93uncharacterized protein LOC112899951 isoform X1
RefseqXP_025824416.11e-93uncharacterized protein LOC112899951 isoform X2
TrEMBLA0A2T7F4561e-92A0A2T7F456_9POAL; Uncharacterized protein
STRINGPavir.Ab01097.1.p2e-93(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27543686
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-36G2-like family protein