PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462886118
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 170aa    MW: 19322.2 Da    PI: 9.5218
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462886118genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.23.8e-11127102128
        NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                ++ktLvfy+grapkg+k++Wvmhe+rl
  462886118   1 MRKTLVFYRGRAPKGRKAEWVMHEFRL 27 
                89***********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.32E-14156IPR003441NAC domain
PROSITE profilePS5100521.037156IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MRKTLVFYRG RAPKGRKAEW VMHEFRLTAL ASRLQIPVMH QHGLKEDWVL CRVFYKSRTT  60
STRPPSEDQT GMPSSEPIQS AASSVATYNA FDDSQTVTKK VPCDFGLPAL SFRRPVSIED  120
LLTIDNSAHT MHIPYSRRPP LFQFQPSPLQ VPQLCLYSAP VNSILEQCKD
Cis-element ? help Back to Top
SourceLink
PlantRegMap462886118
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002443999.16e-41NAC domain-containing protein 21/22
TrEMBLA0A0A9DER23e-45A0A0A9DER2_ARUDO; Uncharacterized protein
STRINGSb07g005610.12e-40(Sorghum bicolor)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12977.12e-21NAC family protein