PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462887789
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 172aa    MW: 19250.6 Da    PI: 9.1289
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462887789genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.51.7e-143694361
               XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
               elkr rr+++NRe+A+rsRqRK++ ++ L+  v++L  + ++L+  l+   +++ + ++
  462887789 36 ELKRKRRMESNRESAKRSRQRKQQHLDDLTSQVDQLRMKKQQLITALNVTAQNYTATEA 94
               79******************************************999887777766655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.3E-113079No hitNo description
SMARTSM003387.7E-133498IPR004827Basic-leucine zipper domain
PfamPF001709.0E-123688IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.2773678IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.81E-113790No hitNo description
CDDcd147025.16E-163989No hitNo description
PROSITE patternPS0003604156IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MSLSGGTISS GTSSGSSRGT QSYGSEGDME LQDRMELKRK RRMESNRESA KRSRQRKQQH  60
LDDLTSQVDQ LRMKKQQLIT ALNVTAQNYT ATEAQNSVLR TQMMELESRL CALREIIYHM  120
NGNQFANAAT ITANPSTIIG AIANYDAFGA NAWNSGMQMV QQPIDQLLYQ CF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15055KRSRQR
Cis-element ? help Back to Top
SourceLink
PlantRegMap462887789
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025822603.17e-97bZIP transcription factor 44-like isoform X1
TrEMBLA0A2S3I2092e-95A0A2S3I209_9POAL; Uncharacterized protein
STRINGSb07g015450.11e-91(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37403276
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-26basic leucine-zipper 44