PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462888523
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family TALE
Protein Properties Length: 241aa    MW: 26687.5 Da    PI: 11.5815
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462888523genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.11.7e-091822191954
                HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
   Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                Fe   ++yps  ++  LA+++gL+ +qV++WF N R +
  462888523 182 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 219
                665559******************************98 PP
2BELL35.91.9e-1221543972
       BELL 39 avaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
               +vag  +++ Yt+lA+++iSrhFr+L+d i+ q+
  462888523 21 TVAGDRASAAYTALASRTISRHFRNLRDGIVAQL 54
               79999**************************996 PP
3BELL35.42.6e-12811143972
       BELL  39 avaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                +vag  +++ Yt+lA+++iSrhFr+L+d i+ q+
  462888523  81 TVAGDRASAAYTALASRTISRHFRNLRDGIVAQL 114
                699999*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF075262.1E-82150IPR006563POX domain
PfamPF075261.5E-881110IPR006563POX domain
PROSITE profilePS5007111.953160223IPR001356Homeobox domain
SMARTSM003896.6E-9163227IPR001356Homeobox domain
CDDcd000861.25E-11163224No hitNo description
SuperFamilySSF466894.23E-18164232IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.9E-28166228IPR009057Homeodomain-like
PfamPF059202.2E-18180219IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MAHDPSLGFA DYFSAADATA TVAGDRASAA YTALASRTIS RHFRNLRDGI VAQLQGVRKA  60
LGEKDVSMPG MTRGETPRLR TVAGDRASAA YTALASRTIS RHFRNLRDGI VAQLQGVRKA  120
LGEKDVSMPG MTRGETPRLR VLDQCIRQQK ALNQAGLMET HPWRPQRGLP ERAVTILRAW  180
LFEHFLHPYP SDVDKHILAR QTGLSRSQVS NWFINARVRL WKPMVEEMAS RTAAGSISSR  240
A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A3e-17169227563Homeobox protein Meis2
3k2a_B3e-17169227563Homeobox protein Meis2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462888523
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9579621e-148EU957962.1 Zea mays clone 1638491 BEL1-related homeotic protein 14 mRNA, complete cds.
GenBankEU9579801e-148EU957980.1 Zea mays clone 1639087 BEL1-related homeotic protein 14 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020184600.14e-88homeobox protein BEL1 homolog
RefseqXP_020184605.14e-88homeobox protein BEL1 homolog
RefseqXP_020184610.14e-88homeobox protein BEL1 homolog
RefseqXP_020184619.14e-88homeobox protein BEL1 homolog
SwissprotQ388974e-70BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBLA0A0A9GPR16e-93A0A0A9GPR1_ARUDO; Uncharacterized protein
STRINGMLOC_62535.25e-89(Hordeum vulgare)
STRINGTraes_4BL_0F02B2343.12e-87(Triticum aestivum)
STRINGTRIUR3_26361-P13e-91(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38143764
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.12e-72TALE family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]
  2. Lozano-Sotomayor P, et al.
    Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
    Plant J., 2016. 88(3): p. 437-451
    [PMID:27402171]