PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462904384
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 236aa    MW: 26508.8 Da    PI: 4.7985
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462904384genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM483.9e-152167148
        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
               lppGfrF+Ptdeel+++yL++k+++  +    +++evd+yk+ePwdL 
  462904384 21 LPPGFRFRPTDEELLTHYLARKAADAGFAP-AAVREVDLYKAEPWDLM 67
               79*************************888.78*************94 PP
2NAM34.94.6e-117094104128
        NAM 104 ktLvfykgrapkgektdWvmheyrl 128
                ktLvfy+grap+g kt+Wvmheyrl
  462904384  70 KTLVFYRGRAPRGDKTNWVMHEYRL 94 
                89*********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.681122IPR003441NAC domain
SuperFamilySSF1019415.23E-3119122IPR003441NAC domain
PfamPF023651.3E-122294IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MMQKCVGMGN DDRSDRCCTP LPPGFRFRPT DEELLTHYLA RKAADAGFAP AAVREVDLYK  60
AEPWDLMPAK TLVFYRGRAP RGDKTNWVMH EYRLVEGHAA WTQTFARGRA QIEWVVCRMF  120
MKKPPGGEAS RQETALHPHD DHLQMSTDEL EGSKAPAPAA AGSEQANFSC DYETYQGLLQ  180
QSDEDFLVKC RELDGLSSSA LPQATLLGED LAADSSFDLQ LPKLLDYESF PFIHDF
Cis-element ? help Back to Top
SourceLink
PlantRegMap462904384
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002462370.17e-34NAC domain-containing protein 92
TrEMBLA0A0E0QRB99e-48A0A0E0QRB9_ORYRU; Uncharacterized protein
STRINGORUFI09G10740.11e-48(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP153521618
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.12e-30NAC domain containing protein 58