PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462904552
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 207aa    MW: 21699.3 Da    PI: 11.6519
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462904552genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.93.9e-212474256
        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56
               + +GVr ++ +gr++AeIrd +     r +r++lg+f+t+eeAa+a++aa++kl+g+
  462904552 24 RLRGVRKRP-WGRYAAEIRDpV-----RkARIWLGTFDTPEEAARAYDAAARKLRGP 74
               679******.**********44.....55**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.18E-172383No hitNo description
PfamPF008472.2E-142373IPR001471AP2/ERF domain
PROSITE profilePS5103223.3012481IPR001471AP2/ERF domain
SMARTSM003804.0E-322487IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-222483IPR016177DNA-binding domain
PRINTSPR003677.0E-102536IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-292682IPR001471AP2/ERF domain
PRINTSPR003677.0E-104763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MAPRRSTSPA GSSGSAERSA DQPRLRGVRK RPWGRYAAEI RDPVRKARIW LGTFDTPEEA  60
ARAYDAAARK LRGPGAATNY PVSTSTAPEA EPKAASTSAS RSTTELSESS SSSGSRDSPA  120
VPSLDLSLGL RRAARVPLLR RGVGSVRRAG SDPFPAVEER GRAERVGFVL VVGYGRRVGA  180
GGEPAAGPQP VVACRGGGVA EHKRLID
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-2020861077Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462904552
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9490132e-55EU949013.1 Zea mays clone 393795 mRNA sequence.
GenBankEU9539072e-55EU953907.1 Zea mays clone 1449156 ethylene-responsive transcription factor 4 mRNA, complete cds.
GenBankEU9701532e-55EU970153.1 Zea mays clone 340982 ethylene-responsive transcription factor 4 mRNA, complete cds.
GenBankEU9753882e-55EU975388.1 Zea mays clone 489369 ethylene-responsive transcription factor 4 mRNA, complete cds.
GenBankKJ7277062e-55KJ727706.1 Zea mays clone pUT5645 AP2-EREBP transcription factor (EREB209) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025821473.11e-33ethylene-responsive transcription factor 4-like
TrEMBLA0A2T7D4R81e-33A0A2T7D4R8_9POAL; Uncharacterized protein
STRINGSi014474m1e-31(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP144461025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.12e-21ERF domain protein 11