PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462906158
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 154aa    MW: 16914.7 Da    PI: 10.4635
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462906158genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.95.4e-142975349
               XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
               e +r rrk++NRe+ArrsR+RK++ ++ L+  v +L+ +Nk+L   l
  462906158 29 ENRRKRRKESNRESARRSRLRKQQHLDDLTSQVNQLKDQNKQLGAAL 75
               5689**************************************98555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.3E-112375No hitNo description
SMARTSM003382.3E-142791IPR004827Basic-leucine zipper domain
PfamPF001703.2E-112973IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.0362992IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.66E-113181No hitNo description
CDDcd147023.13E-153280No hitNo description
PROSITE patternPS0003603449IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MSSGNSSGSS LGTRSSRSEN DLDLKAQMEN RRKRRKESNR ESARRSRLRK QQHLDDLTSQ  60
VNQLKDQNKQ LGAALRVTNQ NLVAVQAQNS VLQTQKMELE SRLGSLTEIL LYMNASTTSA  120
ASNTTTMNNS ITTINSGCDV LGASTWGQPI DLGD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13136RKRRKE
24349RRSRLRK
34350RRSRLRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMap462906158
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003577967.16e-60bZIP transcription factor 44
TrEMBLA0A0A9GYA34e-74A0A0A9GYA3_ARUDO; Uncharacterized protein
STRINGPavir.Ba02250.1.p2e-63(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37403276
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.11e-13basic leucine-zipper 44