PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462906985
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family G2-like
Protein Properties Length: 205aa    MW: 23006.5 Da    PI: 5.8226
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462906985genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like66.93.3e-214297255
    G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelm...kvkgLtlehvkSHLQkYRl 55
               +r+ Wt +LH+ Fv+av+  GG++ A P++++++m   +v +Lt++++kSHLQkYR 
  462906985 42 KRMLWTDDLHKIFVKAVAYHGGPH-AKPSAVMQTMeamGVTSLTIHNIKSHLQKYRH 97
               79********************98.*****987651116889**************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.69E-143898IPR009057Homeodomain-like
PROSITE profilePS512949.92638100IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.9E-214098IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-164297IPR006447Myb domain, plants
PfamPF002493.4E-64396IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MILVHVASKT MSNNKPSQYN VASYMSRILD PCMIRARQPT RKRMLWTDDL HKIFVKAVAY  60
HGGPHAKPSA VMQTMEAMGV TSLTIHNIKS HLQKYRHMEK CGLGAGAPDN VPGTTSPSKA  120
ALNLMSEMMV DTDAVMAEIE VVTQVNNFLM DDVEMVEKNF SVDELQTMEE ELMTEIQLME  180
LNSQIPQSTV DEYMDGLANH AKQFN
Cis-element ? help Back to Top
SourceLink
PlantRegMap462906985
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015628275.12e-70myb family transcription factor PHL12-like isoform X1
TrEMBLB8ANJ69e-69B8ANJ6_ORYSI; Uncharacterized protein
TrEMBLB9FA359e-69B9FA35_ORYSJ; Uncharacterized protein
STRINGORGLA03G0258500.11e-63(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP154991216
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.25e-14G2-like family protein