PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462908010

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

Nin-like

Protein Properties

Length: 279aa MW: 29875.6 Da PI: 9.3981

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462908010	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	72.5	5.7e-23	19	65	4	50
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 ++s e++sk Fslpi++AA+ Lgvc++vLKriCR +GI RWP+Rk+ 462908010 19 SLSYEEISKLFSLPIAEAASILGVCTSVLKRICRSHGIVRWPYRKLV 65 6899*****************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.802	2	87	IPR003035	RWP-RK domain
Pfam	PF02042	4.3E-21	20	65	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence Send to blast
MASTPPAQPQ APPKPTRVSL SYEEISKLFS LPIAEAASIL GVCTSVLKRI CRSHGIVRWP 60 YRKLVSGKAG DDTKNSEREK AKELLELSKA AKQKAFSLSG SSAMSSSTSQ GAGKSQQGGS 120 KAGGQVSPPG KQNALGGLAL VSQTKGIPTY MDDFKYGFPS SGLSRETMKW WGASDNTESA 180 GPAKDMSHES AAHDASKGMT DDELDWGADE GEGEVDVTAE PSAQLCSLRR KAVDDGRKLL 240 NGETRRGQQE FCRLNKRQKL VLAQVFGASL PEEWRSKLV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462908010

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015625714.1	1e-134	uncharacterized protein LOC4326758
TrEMBL	A0A0A9PF78	1e-143	A0A0A9PF78_ARUDO; Uncharacterized protein
STRING	OPUNC01G09100.1	1e-141	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6705	32	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74480.1	2e-10	RWP-RK domain-containing protein